Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2880 |
Symbol | |
ID | 3935347 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2901082 |
End bp | 2902320 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637905248 |
Product | FAD dependent oxidoreductase |
Protein accession | YP_510822 |
Protein GI | 89055371 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.402173 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGACG ACACCACGAG TGTTCTGGGC GCGGGCATCG TGGGCCTGTG TTGCGCGCTG TCCTTGGCCG AGCGGGGGCA CAAGGTGCGC GTGATTGACC GTGATGCGCC GGGGCGGGCG ACGTCTTATG GCAATGCGGG CGTCATATCG CCGTGGTCGA TTGTGCCGCA ATCCATGCCC GGCCTGTGGC GCAAGATCCC CGGTCTGTTG ATGGACCCCG GCAAACCCCT GCGCGTGCGC GCGTCCCATT GGCCCCGAAT GGTCGGCTGG GGCCTGCGAT TTCTGGCCAA TGGGCGGGAG GATCGAGTGC GGCAGGTGTC TGACGCGATG GAGCATCTGT GCGGTCCGTC CGTGGATCTG TACCGCCGCC ACCTGTCCGG CACCGGGCAC GAACATCTGG TGAAGGACGC CTGCTACATC CACGCCTTTC GCAATGCGGG ACAGGCGGAT TTATCAGGCC TGGACTACAG CCTGCGGGCG GAGAAGGGCG CGGATATGGC GGTGTTGGGC GCTGACGATC TGCGCGCGTT GGAGCCTGCG TTGAGCCCCG AGTTCAAGGC CGCCGTCCTG ATCAAGGGAC AGGCCCGCGC GGACTCGCCC GGTGCGATTT GCGCGGCGAT TGCCGAGAAG GCGCGCGCGA TGGGGGTCAC ATTTGTGCAC GACGATGTGG TGGGGGTTGC GCGGGATGGG GACGGCTGGC GGATCGACTG CGCCAGCGGG CCAAGGCACA GCGACACGCT GGTCGTGGCG ATGGGCGTGT GGTCTGCCGC AATGCTGAAG GGCATGGGCT TGCGCCTGCC CTTGCAGGCC GAGCGCGGCT ATCACGTGGA GTTTGAGGGT CCCGGCGTGG CGCTGACCCA TTCGGTCATG GATGTGGATC GCAAGGTGGT GCTGAGCAGT ATGGAGGGGC GTATTCGCAT CGCGGGTCAA GCAGAGTTTG CGGCCATCGA CGCGCCACCG GACCCCACGC GCAAGGCGGT CCTGACACGG CAGGCCAGCG CCGCCCTGCC CGGCCTGAAT GCGCGCGAAG CGGAGGTCTG GATGGGCCAC CGGCCCTCCT TCCCCGACAG TCTTCCGGCG ATCGGAGAGG TGCAAGGGCA AGAGGGGCTG TTCGCCTGTT TCGGCCATTC GCACTACGGA TTGATGATGG CGCCAAAATC CGGGGAAATC GTGGCGGATC TGGTGGAGGG GCGGGTGCAG AACCGGGACC TGTCGGCTTA CGGTGTCGCG CGGTTTTAG
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Protein sequence | MNDDTTSVLG AGIVGLCCAL SLAERGHKVR VIDRDAPGRA TSYGNAGVIS PWSIVPQSMP GLWRKIPGLL MDPGKPLRVR ASHWPRMVGW GLRFLANGRE DRVRQVSDAM EHLCGPSVDL YRRHLSGTGH EHLVKDACYI HAFRNAGQAD LSGLDYSLRA EKGADMAVLG ADDLRALEPA LSPEFKAAVL IKGQARADSP GAICAAIAEK ARAMGVTFVH DDVVGVARDG DGWRIDCASG PRHSDTLVVA MGVWSAAMLK GMGLRLPLQA ERGYHVEFEG PGVALTHSVM DVDRKVVLSS MEGRIRIAGQ AEFAAIDAPP DPTRKAVLTR QASAALPGLN AREAEVWMGH RPSFPDSLPA IGEVQGQEGL FACFGHSHYG LMMAPKSGEI VADLVEGRVQ NRDLSAYGVA RF
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