Gene Jann_2880 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2880 
Symbol 
ID3935347 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2901082 
End bp2902320 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content67% 
IMG OID637905248 
ProductFAD dependent oxidoreductase 
Protein accessionYP_510822 
Protein GI89055371 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.402173 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGACG ACACCACGAG TGTTCTGGGC GCGGGCATCG TGGGCCTGTG TTGCGCGCTG 
TCCTTGGCCG AGCGGGGGCA CAAGGTGCGC GTGATTGACC GTGATGCGCC GGGGCGGGCG
ACGTCTTATG GCAATGCGGG CGTCATATCG CCGTGGTCGA TTGTGCCGCA ATCCATGCCC
GGCCTGTGGC GCAAGATCCC CGGTCTGTTG ATGGACCCCG GCAAACCCCT GCGCGTGCGC
GCGTCCCATT GGCCCCGAAT GGTCGGCTGG GGCCTGCGAT TTCTGGCCAA TGGGCGGGAG
GATCGAGTGC GGCAGGTGTC TGACGCGATG GAGCATCTGT GCGGTCCGTC CGTGGATCTG
TACCGCCGCC ACCTGTCCGG CACCGGGCAC GAACATCTGG TGAAGGACGC CTGCTACATC
CACGCCTTTC GCAATGCGGG ACAGGCGGAT TTATCAGGCC TGGACTACAG CCTGCGGGCG
GAGAAGGGCG CGGATATGGC GGTGTTGGGC GCTGACGATC TGCGCGCGTT GGAGCCTGCG
TTGAGCCCCG AGTTCAAGGC CGCCGTCCTG ATCAAGGGAC AGGCCCGCGC GGACTCGCCC
GGTGCGATTT GCGCGGCGAT TGCCGAGAAG GCGCGCGCGA TGGGGGTCAC ATTTGTGCAC
GACGATGTGG TGGGGGTTGC GCGGGATGGG GACGGCTGGC GGATCGACTG CGCCAGCGGG
CCAAGGCACA GCGACACGCT GGTCGTGGCG ATGGGCGTGT GGTCTGCCGC AATGCTGAAG
GGCATGGGCT TGCGCCTGCC CTTGCAGGCC GAGCGCGGCT ATCACGTGGA GTTTGAGGGT
CCCGGCGTGG CGCTGACCCA TTCGGTCATG GATGTGGATC GCAAGGTGGT GCTGAGCAGT
ATGGAGGGGC GTATTCGCAT CGCGGGTCAA GCAGAGTTTG CGGCCATCGA CGCGCCACCG
GACCCCACGC GCAAGGCGGT CCTGACACGG CAGGCCAGCG CCGCCCTGCC CGGCCTGAAT
GCGCGCGAAG CGGAGGTCTG GATGGGCCAC CGGCCCTCCT TCCCCGACAG TCTTCCGGCG
ATCGGAGAGG TGCAAGGGCA AGAGGGGCTG TTCGCCTGTT TCGGCCATTC GCACTACGGA
TTGATGATGG CGCCAAAATC CGGGGAAATC GTGGCGGATC TGGTGGAGGG GCGGGTGCAG
AACCGGGACC TGTCGGCTTA CGGTGTCGCG CGGTTTTAG
 
Protein sequence
MNDDTTSVLG AGIVGLCCAL SLAERGHKVR VIDRDAPGRA TSYGNAGVIS PWSIVPQSMP 
GLWRKIPGLL MDPGKPLRVR ASHWPRMVGW GLRFLANGRE DRVRQVSDAM EHLCGPSVDL
YRRHLSGTGH EHLVKDACYI HAFRNAGQAD LSGLDYSLRA EKGADMAVLG ADDLRALEPA
LSPEFKAAVL IKGQARADSP GAICAAIAEK ARAMGVTFVH DDVVGVARDG DGWRIDCASG
PRHSDTLVVA MGVWSAAMLK GMGLRLPLQA ERGYHVEFEG PGVALTHSVM DVDRKVVLSS
MEGRIRIAGQ AEFAAIDAPP DPTRKAVLTR QASAALPGLN AREAEVWMGH RPSFPDSLPA
IGEVQGQEGL FACFGHSHYG LMMAPKSGEI VADLVEGRVQ NRDLSAYGVA RF