Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2876 |
Symbol | |
ID | 3935343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2895705 |
End bp | 2896733 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 637905244 |
Product | D-cysteine desulfhydrase |
Protein accession | YP_510818 |
Protein GI | 89055367 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2515] 1-aminocyclopropane-1-carboxylate deaminase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.247142 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATCCTC GCTTGCCCAT CGTCACCGCC CCCACCCCGC TGGACCCCGC CGAAAATCTG TCCGCGCATC TTGGGATAGA CCTGCACATC AAACGCGATG ACCTTGCCGG GCCCACATTG GGCGGCAACA AGGCGCGGCA ATTGGAATAT TACTTTGGCG CGGCACAGGC CGAGCGGGCG GATGTGATCC TGATCACCGG GGCGGTCCAG TCCAACTTCG CGCGCCTCGC GGTGGCCATC GCGCGGCGAC AGGGGATGGA GGCAGTGATC CAGCTGGAGG ACCGCGTGCC GGGCAAACCC GCGCAGTACC GCGCAGGCGG CAATGTGCTT CTGTCTCGGT TGATGGGGGC GGAGATCCTC AACTACCCCG AGGGGGAGGA TGAAGCGGGC GCCGATGCCG CCCTTCACAC CAAGGCAGAG GCGTTGCGCG CGGAGGGCAA GCGGCCCTAT GTGATTCACC TGTCGGAAGG GCACCCGCCG CTGGGGGCGC TGGGATATGT GGATGCGGCC CATGAGATCC TGGCGCAGAA GTCTGACTTC GACATCTTCG TCGTGGCATC GGGCAGCGGA TCGACCCATG CGGGGCTATT AGCCGGGCTG CGGGGGGCCG GATGCACGGC CCCTGTCATC GGGTCCTGCG TGCGGCGCGC GGCATCGGTG CAGACGCCCC GGATCAGGCG CGTGACTGAC CGATTGGCCA AGCTACACGA CGGCGCGACG CGGGTCACGG ACGCGGATAT CATCACATGG GACGGGGCCT TGTCGCCGGG ATATGGCCAG TTGGGACCAG CCGCGCGGGA CGCGATGGAG ATGATGGCGC GCCATGAGGG GCTGATGCTG GACCCGGTCT ATACCGCCAA GAGTTTCGCC GCGATCCCGG CCCTTGTGGC CAGCGGCGAG ATCCCCAAGG GCAGCCGGGT GTGTTTCGTG CATACCGGCG GGCTGGCGGC TTTGTTTGCC TATGAGGCCG CGCTGACAGA GGGGCTTGAA GCGCGGCCTA CGGATCTTCC AGACGCGGCG CGGCGCTGA
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Protein sequence | MHPRLPIVTA PTPLDPAENL SAHLGIDLHI KRDDLAGPTL GGNKARQLEY YFGAAQAERA DVILITGAVQ SNFARLAVAI ARRQGMEAVI QLEDRVPGKP AQYRAGGNVL LSRLMGAEIL NYPEGEDEAG ADAALHTKAE ALRAEGKRPY VIHLSEGHPP LGALGYVDAA HEILAQKSDF DIFVVASGSG STHAGLLAGL RGAGCTAPVI GSCVRRAASV QTPRIRRVTD RLAKLHDGAT RVTDADIITW DGALSPGYGQ LGPAARDAME MMARHEGLML DPVYTAKSFA AIPALVASGE IPKGSRVCFV HTGGLAALFA YEAALTEGLE ARPTDLPDAA RR
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