Gene Jann_2876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2876 
Symbol 
ID3935343 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2895705 
End bp2896733 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content67% 
IMG OID637905244 
ProductD-cysteine desulfhydrase 
Protein accessionYP_510818 
Protein GI89055367 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2515] 1-aminocyclopropane-1-carboxylate deaminase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.247142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCCTC GCTTGCCCAT CGTCACCGCC CCCACCCCGC TGGACCCCGC CGAAAATCTG 
TCCGCGCATC TTGGGATAGA CCTGCACATC AAACGCGATG ACCTTGCCGG GCCCACATTG
GGCGGCAACA AGGCGCGGCA ATTGGAATAT TACTTTGGCG CGGCACAGGC CGAGCGGGCG
GATGTGATCC TGATCACCGG GGCGGTCCAG TCCAACTTCG CGCGCCTCGC GGTGGCCATC
GCGCGGCGAC AGGGGATGGA GGCAGTGATC CAGCTGGAGG ACCGCGTGCC GGGCAAACCC
GCGCAGTACC GCGCAGGCGG CAATGTGCTT CTGTCTCGGT TGATGGGGGC GGAGATCCTC
AACTACCCCG AGGGGGAGGA TGAAGCGGGC GCCGATGCCG CCCTTCACAC CAAGGCAGAG
GCGTTGCGCG CGGAGGGCAA GCGGCCCTAT GTGATTCACC TGTCGGAAGG GCACCCGCCG
CTGGGGGCGC TGGGATATGT GGATGCGGCC CATGAGATCC TGGCGCAGAA GTCTGACTTC
GACATCTTCG TCGTGGCATC GGGCAGCGGA TCGACCCATG CGGGGCTATT AGCCGGGCTG
CGGGGGGCCG GATGCACGGC CCCTGTCATC GGGTCCTGCG TGCGGCGCGC GGCATCGGTG
CAGACGCCCC GGATCAGGCG CGTGACTGAC CGATTGGCCA AGCTACACGA CGGCGCGACG
CGGGTCACGG ACGCGGATAT CATCACATGG GACGGGGCCT TGTCGCCGGG ATATGGCCAG
TTGGGACCAG CCGCGCGGGA CGCGATGGAG ATGATGGCGC GCCATGAGGG GCTGATGCTG
GACCCGGTCT ATACCGCCAA GAGTTTCGCC GCGATCCCGG CCCTTGTGGC CAGCGGCGAG
ATCCCCAAGG GCAGCCGGGT GTGTTTCGTG CATACCGGCG GGCTGGCGGC TTTGTTTGCC
TATGAGGCCG CGCTGACAGA GGGGCTTGAA GCGCGGCCTA CGGATCTTCC AGACGCGGCG
CGGCGCTGA
 
Protein sequence
MHPRLPIVTA PTPLDPAENL SAHLGIDLHI KRDDLAGPTL GGNKARQLEY YFGAAQAERA 
DVILITGAVQ SNFARLAVAI ARRQGMEAVI QLEDRVPGKP AQYRAGGNVL LSRLMGAEIL
NYPEGEDEAG ADAALHTKAE ALRAEGKRPY VIHLSEGHPP LGALGYVDAA HEILAQKSDF
DIFVVASGSG STHAGLLAGL RGAGCTAPVI GSCVRRAASV QTPRIRRVTD RLAKLHDGAT
RVTDADIITW DGALSPGYGQ LGPAARDAME MMARHEGLML DPVYTAKSFA AIPALVASGE
IPKGSRVCFV HTGGLAALFA YEAALTEGLE ARPTDLPDAA RR