| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2874 |
|---|
| Symbol | |
|---|
| ID | 3935341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2894619 |
|---|
| End bp | 2895194 |
|---|
| Gene Length | 576 bp |
|---|
| Protein Length | 191 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637905242 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_510816 |
|---|
| Protein GI | 89055365 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.228193 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTGTGC GGGTGGAGAT GTTGACTGGC GACGGGTTGA CCGCCGCGCT GCCGGATCTC
GCCCGCCTGC GAATGGAGGT CTTTGCGGAT TTTGCCTATC TCTATCAGGG GGATGCGGCT
TATGAGGCCG ATTATCTGCG GTCCTACCGC GACACACCCG GCGCGGTGCT TGTCGCGGCC
CTGGACGGGG ACACAATCGT CGGCGCGGCC ACGGGCATGC TGCTCCACCA CCACGGCGAC
GCGGCCCAAA TCTCCGGCGA TCTGCCGCAA GACACCTTCT ACTGCGCTGA AAGCGTGCTG
TTGCCCGCCT ATCGTGGCCG CGGTCTCGGC CACCGTTTCT TTGACCTGCG CGAAGACCAC
GCCCGCGCGC TCGACGCCAC CCACTCCGCC TTCTGCGCCG TGATCCGCCC GCCGGACCAC
CCCGCGCGGC CCGCCGATTA CAGTCCCCTC GATCCCTTCT GGCGCGCGCG GGGCTATGCG
CCCAAACCGG GCGTCACGGC CACTTTCTCC TGGACCGATA TCGGCGACAG CGCCGAGACC
CCGAAACACC TGCAAGTCTG GACCAAACGC TTATGA
|
|---|
| Protein sequence | MTVRVEMLTG DGLTAALPDL ARLRMEVFAD FAYLYQGDAA YEADYLRSYR DTPGAVLVAA
LDGDTIVGAA TGMLLHHHGD AAQISGDLPQ DTFYCAESVL LPAYRGRGLG HRFFDLREDH
ARALDATHSA FCAVIRPPDH PARPADYSPL DPFWRARGYA PKPGVTATFS WTDIGDSAET
PKHLQVWTKR L
|
|---|
| |