Gene Jann_2872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2872 
SymbolinfA 
ID3935339 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2893447 
End bp2893665 
Gene Length219 bp 
Protein Length72 aa 
Translation table11 
GC content55% 
IMG OID637905240 
Producttranslation initiation factor IF-1 
Protein accessionYP_510814 
Protein GI89055363 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0361] Translation initiation factor 1 (IF-1) 
TIGRFAM ID[TIGR00008] translation initiation factor IF-1 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0587815 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAAGG AAGAGATGCT CGAATTTCCT GGTGTCGTTA AGGAACTCCT GCCAAACGCG 
ACATTCCGGG TCGAGCTCGA AAACGGCCAT GAGATCATCG CGCATACGGC AGGCAAGATG
CGCAAGAACC GCATCCGGGT TCTGGCAGGC GACAAAGTCC AGGTCGAAAT GACCCCCTAT
GATCTGACCA AGGGCCGGAT CAACTACCGC TTCAAGTGA
 
Protein sequence
MAKEEMLEFP GVVKELLPNA TFRVELENGH EIIAHTAGKM RKNRIRVLAG DKVQVEMTPY 
DLTKGRINYR FK