| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2852 |
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| Symbol | |
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| ID | 3935318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2872494 |
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| End bp | 2873420 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905219 |
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| Product | branched chain amino acid: 2-keto-4-methylthiobutyrate aminotransferase |
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| Protein accession | YP_510794 |
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| Protein GI | 89055343 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.456273 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCAGACA CGCACACCAC CCACGACGCC CTGGAAGATC CGCGCAACGC GGACATCCTG
ATCTATGTGA ACGGCGATCT CGTTCACCGG GACGACGCGA AGGTCTCGGT CTATGACAGC
GGGTTTCTGC TTGGCGATGG CATGTGGGAA GGTCTGCGCC TTTATGACGG GGTGTGGAGC
TTTTTTGACG ACCACATGGA CCGCTTCTTC GACAGTTGCA AAGCGGTGTC GCTGGATGTG
GGCATGGACC GAGCCGGAGT TTTCGCGGCG CTGGAGGCCA CGCGGAAGGC CAACGATATG
CACACGGATG TGCATTGCCG CCTGATGCTG ACCCGTGGCG TGAAAGTGAA GCCGTTCCAG
CACCCATCGC TATCGCGCTC CGGCCCGACG CTGGTGATTA TCTGTGAGCA TTCCAAGCCG
GTTGACCGGC TGCAGGGCGC GGGCATCCGG CTGGCGACCG TCCCGCAGGT GCGCGGATTG
CCGATGAGCC AGGACGCGAA ATACAACAGC CATTCCAAGC TGAATTGCGT CATTGCCTGC
CTGCAGGCCG AACAGGCGGG CGCAGATGAG GGGTTGATGC TGGACCCCAA TGGCTTCGTG
AACACCACCA ATGCGTGCAA CTTCTTCATC GTGCGCAAGG GGGAGGTTTG GACCTCCACC
GGGGATTATT GCATGAACGG GGTGACGCGG CAGAAGGTGA TCGACCTGTG CCGGGCCGAG
GGGATTGCGG TGTTCGAGAA GAACTTCTCG CTCTACGAGG CTGTGTCGGC AGATGAGGCG
TTTCTGACCG GTACCTTCGG GGCACAGACC CCGGTGGCGG AGATCGACGG GAAGGCCATT
GGTAATGGCG AACGCCCCAT CACCACACGC ATTCAGGCCG CCTATAAGGC GTTGATCGCG
CACCATATTG CGGAGATGCG CAGCTAG
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| Protein sequence | MSDTHTTHDA LEDPRNADIL IYVNGDLVHR DDAKVSVYDS GFLLGDGMWE GLRLYDGVWS
FFDDHMDRFF DSCKAVSLDV GMDRAGVFAA LEATRKANDM HTDVHCRLML TRGVKVKPFQ
HPSLSRSGPT LVIICEHSKP VDRLQGAGIR LATVPQVRGL PMSQDAKYNS HSKLNCVIAC
LQAEQAGADE GLMLDPNGFV NTTNACNFFI VRKGEVWTST GDYCMNGVTR QKVIDLCRAE
GIAVFEKNFS LYEAVSADEA FLTGTFGAQT PVAEIDGKAI GNGERPITTR IQAAYKALIA
HHIAEMRS
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