Gene Jann_2851 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2851 
Symbol 
ID3935317 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2871077 
End bp2872108 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content67% 
IMG OID637905218 
ProductL-threonine aldolase 
Protein accessionYP_510793 
Protein GI89055342 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.185965 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCAAT ATACCGCCGC CGCCATGCCC GCCGGCCCGA TTGCCGCCGA CCTTCGGTCT 
GACACGGTTA CGCAGCCCTG TGCGGCCATG CGCGCGGCGA TGGCAGGGGC CGAGGTGGGC
GATGACGTTT ACGGCGACGA CCCCTGCATC AACCGGCTGG AGGCCTCTCT GGCCGAGCGG
TTGGGCAAGG ACGAGGGGCT GTTTGTCCCG TCCGGCACGC AGTCGAACCT TCTCGCTATG
CTTGCCCATT GCGGCCGGGG TGAAGAGGTG ATCGCGGGCG ACAGCTACCA CGTGATCCGC
TACGAGGCGG CGGGGGCGTC GGTCTTGGGG GGCGTGCCGC TTCACGCGCT GAACGTGGCG
GACGATGGTG CGGTCGAGGC GGGGGATGTG ACGGCGGCGA TCAAGGACGA CGACAGCCAC
CACCCGATCA GCCGTTTGTT ATCTTTGGAG AATACCAATT ACGGACGCGC CATCCCCCTG
CCCCGCATGA CAGCCGCGAT TGACGCGGGC CGCGCGGGTG GCCTCAACCT GCATCTGGAC
GGCGCGCGGT TTTTCAACGC GATCACGGCT CTTGGGTGCA CGGAGACGGA GCTTGCGGGT
CCGTTCGACA CGGTGTCCGT CTGCCTCTCC AAAGGGTTGG GGGCCCCGGT GGGCTCGGTC
CTCGTCGGGC CTCCGGACCT GCTGGCCGCC GCGCGGCGGA TGCGAAAGAT GCTTGGCGGC
GGCATGCGGC AGGCGGGTGT TCTGGCCGCC GCCGGGCTTC ACGCCCTAGA ACACAATGTT
AAAAGATTGG CCGACGATCA CGCCCGGGCC GAAGCGCTGG CCGCACATCT GTCCAATCTG
GGGCTCGGCG ACGTCAGCCA GGCCACCAAC ATGGTTTTCC TGACCCCGCA TCCGGGCGTG
GATCTGGCCC CCCTTGCGGA CCACGGTATC CGAACCTCTG CGCCGGAACC CGCCCTGCGG
CTGGTCCTGC ACCGTGACAT CGACGATGGG GCCTTCGACA CGGTTCTGAA GGCATTCTCA
GCCTGCGCCT AA
 
Protein sequence
MSQYTAAAMP AGPIAADLRS DTVTQPCAAM RAAMAGAEVG DDVYGDDPCI NRLEASLAER 
LGKDEGLFVP SGTQSNLLAM LAHCGRGEEV IAGDSYHVIR YEAAGASVLG GVPLHALNVA
DDGAVEAGDV TAAIKDDDSH HPISRLLSLE NTNYGRAIPL PRMTAAIDAG RAGGLNLHLD
GARFFNAITA LGCTETELAG PFDTVSVCLS KGLGAPVGSV LVGPPDLLAA ARRMRKMLGG
GMRQAGVLAA AGLHALEHNV KRLADDHARA EALAAHLSNL GLGDVSQATN MVFLTPHPGV
DLAPLADHGI RTSAPEPALR LVLHRDIDDG AFDTVLKAFS ACA