| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2850 |
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| Symbol | |
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| ID | 3935316 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2869461 |
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| End bp | 2870948 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905217 |
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| Product | GntR family transcriptional regulator |
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| Protein accession | YP_510792 |
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| Protein GI | 89055341 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.107434 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCA TTTCAGAGCA TCATATCTTC CTTTCGGACG ACGCAAATGT GGGCCTGCAA
ACCCGCCTGA AAGACGCCAT CACCCGCGCG ATCTGGGATG GTCGCTTCGC GCCGGGGGAC
CGCCTTCCCG CCACACGTGC CCTGGCGCGA CACCTTGGGA TCAGCCGGAT CACCGTGAGT
CTGGCCTATG ATGCGCTTTT ATCGACGGGC TACATCGTCT CCATCGCGCG GTCGGGGTAT
TTCGTGGCCA GTGACGCGCC CACGCGGATG GAGATCGTGA CGCCCGGCAA GGGCGATGCG
CGCGACCGGT TGGATTGGGC CGCGCGCCTG GGGCCTGTGC CGCCCGCCCT TGGGGCGCAG
GCCACCCCCG CCGATTGGCG CCGGTTTCGC TATCCGTTCA TTTTTGGGGA GCCCGATGTG
GCACGCTTCC CGGTCGATGA TTGGCGCGAT TGTGTGCGTC GCGGTCTTGG CAAGCGCCAT
TTTGAGCAGG TCGCCGATGA CGCCAGCGAC CGCGACGACC CGTTTCTGGT GGAGCAGATC
GTGCGCCGGT CGGTCTCTGG GCGCGGTGTG GCGGCGACGG TGGATGAGGT TCTGGTGACG
GCGGGGGCGC AGAATGCGCT GTGGCTGATG GTGCAGGTTC TTTTTGGCGG GCAGGGCGGG
GAGGTGGCGA TGGAGGATCC GGGCTACCCG GAGTTGCGCA ACCTCCTGCG CCAGCAGCGG
TTGACGATCC ACCCGGTCCC CGTGGACCGC GACGGCCTGA AGGTCGACCG CATCCCCGAG
GGCGTGCGTG CGGTTTTCGT GACGCCCTCC CATCAGGCAC CGACGGGGGC CACGATGTCG
ATGGCGCGGC GACAGGCCTT GCTGGAGCGG GCGGAGGCGG AGGATTTCGT CGTGATCGAG
GACGATTACG ATTATGAGAT GAGCTATGCC TCCCCATCCC TGCCTGCCCT GAAATCACTC
GATCAGCGGG GCCGGGTGAT CTATATCGGC AGCTTCTCTA AATCGATCTT TCCCGGTCTT
CGCTTGGGGT ATCTGACCGC CGATGCCCGT GTCGTGGAAC ATGCCCGCGC GATCCGCACG
TTATCGGAGC GTCACCCGCC GGGGCTGACC CAACGCACGG TCGCCTATTT CCTGTCGGAG
GGGCATTACA ACAGCCATTC GCGCCGGATG CGGATGCGGA TGGCGCGCCG CAATGAAGTG
TTGCGGGAGG CTTTGGCGGA GCACGGGCTG ACGCCTGCCC TGCGGCGCGC GACCGGGGGC
ACGACGCTCT GGCTCCTGGG GCCGGAGGAT CTGGATGCGG ATGCGCTAGC GGTGTCGTTG
CGCGACAAGA GCGTGCTGAT CGAGGCTGGA TCGGCCTTCT ACGCGGGGGG CGACGCGCCG
CGCAATCGGG TGCGGTTGGG CTTCGCCACG ATCGAGACGG CGCGGATTGC GGACGGTGTG
GCGCTAATTG CCGAGGCGAT CAGGGAGCAG GCTCCAACCC CGCGCTAA
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| Protein sequence | MAIISEHHIF LSDDANVGLQ TRLKDAITRA IWDGRFAPGD RLPATRALAR HLGISRITVS
LAYDALLSTG YIVSIARSGY FVASDAPTRM EIVTPGKGDA RDRLDWAARL GPVPPALGAQ
ATPADWRRFR YPFIFGEPDV ARFPVDDWRD CVRRGLGKRH FEQVADDASD RDDPFLVEQI
VRRSVSGRGV AATVDEVLVT AGAQNALWLM VQVLFGGQGG EVAMEDPGYP ELRNLLRQQR
LTIHPVPVDR DGLKVDRIPE GVRAVFVTPS HQAPTGATMS MARRQALLER AEAEDFVVIE
DDYDYEMSYA SPSLPALKSL DQRGRVIYIG SFSKSIFPGL RLGYLTADAR VVEHARAIRT
LSERHPPGLT QRTVAYFLSE GHYNSHSRRM RMRMARRNEV LREALAEHGL TPALRRATGG
TTLWLLGPED LDADALAVSL RDKSVLIEAG SAFYAGGDAP RNRVRLGFAT IETARIADGV
ALIAEAIREQ APTPR
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