| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2849 |
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| Symbol | |
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| ID | 3935315 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2866818 |
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| End bp | 2869256 |
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| Gene Length | 2439 bp |
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| Protein Length | 812 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905216 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_510791 |
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| Protein GI | 89055340 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | [TIGR00528] glycine cleavage system T protein
[TIGR01375] sarcosine oxidase, gamma subunit family, heterotetrameric form |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0394509 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGAAA TTCCCTCCCA TGCGCGCGTC GTCATTGTCG GCGGCGGTGT TGCCGGGTGT
TCCGTAGCCT ATCACCTGAC GAAACTTGGC TGGACCGATG TGGTGCTTTT GGAACGCAAG
CGCCTGACAA GCGGCACCAC ATGGCATGCG GCAGGCCTGA TCGCGCAATT GCGTGCGACG
AAGAACATGA CCCGCCTCGC GAAATATTCC CAGGAACTCT ACGGCAATCT GGAGGCTGAG
ACCGGCGTCG CCACAGGCTT CCGCCGCTGC GGTTCCATCA CCATGGCGCT GACCGATCAC
CGCGCGGAGG AGATCCGCAG GCAGGCCTCC ATGGCCCGCT CCTTCGGCGT GGAGGTGGAG
GAAATCGACG CCGCCGCCGT CCTGAAACAC TACCCCCACG TGAACACCGA CGGCATGACA
GCCGCCGTCT GGCTGCCGCT GGATGGGCAA GGCGACCCGG CCAACATCGC GCTTTCGATG
GCCAAAGGCG CGCGCATGGG CGGGGCGACC GTGCTGGAAA ACGTCAAGGT CACGGGCGTC
GATACCGATG GCGGCAAGGT GGGCGGCGTC AGCTGGGAAG CGGACGGAGA CACGGGCACG
ATCAAAGCCG ACATCGTCGT GAATTGCGCC GGCATGTGGG CGCGCGACTT TGGCCAGATG
GCCGGCGTGA ACGTGCCGCT TCAGGCCTGC GAACACTTCT ACATCGTCAC AGAATCCATC
CCCAATCTCA GCCAGCTCCC CGTCCTTCGC GTGCCCGACG AATGCGCCTA TTACAAGGAA
GACGCAGGAA AAATGCTTCT GGGCGCTTTC GAGCCGGTCT CCAAACCCTG GGGTCCGATC
CCGGACGATT TTGAATTCGA CCAATTGCCC GAGGATTTCG ACCACTTCGA GCCGATCCTT
GAAAACGCCA TTGAGCGGAT GCCGATGCTG GCGGAGGCGG GCATTCACAC CTTCTTTAAT
GGTCCCGAAA GTTTTACTCC CGATGATGCC TATCACATGG GCCCCGCGCC GGAGGTGGAC
GGCTATTGGG TCTGCGCGGG CTTCAACTCC ATCGGCATCC AGTCGGCGGG CGGGGCCGGA
TGGGCCTTGG CGGAATGGAT GGAAAACGGC ATCCCCCCCT TCGATGTGGG GGAGGTCGAC
ATTCGCCGGA TGCAGCCCTT CCAGCGCAAC AAACGCTACC TGAAGGAACG CGCGTCCGAG
ACGCTCGGCC TGCTTTACGC CGACCATTAC CCCAACCGTC AAAAGGCCAC CGCACGCGGT
GTGCGACGCT CGCCGTTGCA TGAACATCTC AAGGCGCAGG GGGCCGTCTT CGGTGAATTG
GCCGGGTGGG AACGGGCCAA TTGGTTCGCC AATGAAGGTC AGGAACGGGA ATATAAATAC
GACTGGAAGG GTCAGAACTG GTTCGACAAT CAGGCGCAGG AACACCGCGC GGTACGCGAG
ACGGTGGGCC TCTATGACAT GTCGTCATTC GGCAAGATCC GCGTCGATGG CCCCGATGCG
GAGGCGTTCC TGAACCGCAT CGCGGCGGGC AACATGTCCG TGCCCGTGGG CAAGATCGTC
TACACGCAAT TCCTGAACAT GCGTGGCGGG ATTGAAGCCG ACGTGACGAT CACGCGGCTG
GCGCAGGACA GTTATTTCAT CGTCACCCCG GCGGCCACGC TGATCCGCGA CATGGCGTGG
CTGAAGATGA ACCGGCGCGA CGAGGTGGTG ATCCTGTCGG ACATCACGGC ATCGGAGGCG
GTGATCTGCG TCATGGGCCC GAATTCCCGC GCGCTGATGC AATCAGTCAG CCCGCATGAT
TGGTCGAATG CGGCCTTCCC CTTTGGCGTG GCGCAGCAGG TGGACATCGG CCTCGGCATC
GCCCGCGCCC ACCGCGTCAC TTATGTGGGC GAATTGGGGT GGGAGCTGTA TGTCTCCGCC
GATCAGGCCG CCCATGTGTT TGAAACCTTG CATGAGGCGG GCGCCGATCA CGGGTTGCGG
CTCTGCGGCT TGCACATGAT GGACAGCGCC CGGATCGAAA AGGCCTTCCG CCATTTTGGC
CATGACATCA CCGGCGAGGA TCACGTGATC GAGGCCGGTC TTGGGTTCGC AGTGTCCAAG
ACCAAGAACA ATTTCATCGG GGCCGATGCC GTGGCCCGCA AGCGCGACGA GGGGCTGCAA
ATGCGGATGG TCCAGTTCAA ACTGACGGAT CCCGAAGCGA TGCTGTTCCA CGCAGAGCCG
ATCATTCGCA ACGGAGAGGT CGTCAGCTAC ATCACCTCCG GCAATTACGG CCACACTTTG
GGCGGCGCGA TTGGAATGGG CTACGTCCCC TGCCCCGGTG AAACCCCGGC AGAGATGCTG
GCCTCCGCGT ACGAGATCGA GGTCGCGGGC ACTCGCGTGG CGGCAGAGGC CAGCACCCGT
CCGATGTATG ATCCAACGTC CGAGCGGGCA CGCGGCTGA
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| Protein sequence | MTEIPSHARV VIVGGGVAGC SVAYHLTKLG WTDVVLLERK RLTSGTTWHA AGLIAQLRAT
KNMTRLAKYS QELYGNLEAE TGVATGFRRC GSITMALTDH RAEEIRRQAS MARSFGVEVE
EIDAAAVLKH YPHVNTDGMT AAVWLPLDGQ GDPANIALSM AKGARMGGAT VLENVKVTGV
DTDGGKVGGV SWEADGDTGT IKADIVVNCA GMWARDFGQM AGVNVPLQAC EHFYIVTESI
PNLSQLPVLR VPDECAYYKE DAGKMLLGAF EPVSKPWGPI PDDFEFDQLP EDFDHFEPIL
ENAIERMPML AEAGIHTFFN GPESFTPDDA YHMGPAPEVD GYWVCAGFNS IGIQSAGGAG
WALAEWMENG IPPFDVGEVD IRRMQPFQRN KRYLKERASE TLGLLYADHY PNRQKATARG
VRRSPLHEHL KAQGAVFGEL AGWERANWFA NEGQEREYKY DWKGQNWFDN QAQEHRAVRE
TVGLYDMSSF GKIRVDGPDA EAFLNRIAAG NMSVPVGKIV YTQFLNMRGG IEADVTITRL
AQDSYFIVTP AATLIRDMAW LKMNRRDEVV ILSDITASEA VICVMGPNSR ALMQSVSPHD
WSNAAFPFGV AQQVDIGLGI ARAHRVTYVG ELGWELYVSA DQAAHVFETL HEAGADHGLR
LCGLHMMDSA RIEKAFRHFG HDITGEDHVI EAGLGFAVSK TKNNFIGADA VARKRDEGLQ
MRMVQFKLTD PEAMLFHAEP IIRNGEVVSY ITSGNYGHTL GGAIGMGYVP CPGETPAEML
ASAYEIEVAG TRVAAEASTR PMYDPTSERA RG
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