| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2839 |
|---|
| Symbol | |
|---|
| ID | 3935305 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2856152 |
|---|
| End bp | 2857033 |
|---|
| Gene Length | 882 bp |
|---|
| Protein Length | 293 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 637905206 |
|---|
| Product | MCP methyltransferase, CheR-type |
|---|
| Protein accession | YP_510781 |
|---|
| Protein GI | 89055330 |
|---|
| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG1352] Methylase of chemotaxis methyl-accepting proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.40202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.212015 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGAC CACATATGAT CCCTGCCGTC GGTCAAGCCA ATGGCCAGAC GATTGGCGAC
GCCGCCTTTC GGACTGTCGC GCGCCACCTG CAGGAGCAGA CCGGAATCGT GCTGACGGAC
GTCAAGAAGG GTTTGGCCGT GTCTCGGTTG TCACGGCGCT TGCGCGCACT GCAACTGCCG
GATTTCGACG CCTATTGCGA TGTGTTGTCG GGCCCCGATG GCGCGGCGGA GATGCAGGAA
ATGGTTCTTC TGCTGACAAC GAATGTCACA AGGTTCTTCA GGGAACCGCA TCACTACGAT
GCCCTGCGCA CCCAGATTCT GCCAGGTCTG GTGGCGAAGG CGAAATCCGG CGGCCGGGTG
CGCCTTTGGT CGGCCGGGTG TTCGTCGGGG GAGGAGGCCT ATTCGATGGC GATGTGCGTG
TTGGAGGCCT TCCCGCAAGC CGCCCCGTCC AACATTCGCA TCCTCGCCAC CGATATTGAC
AGCAACATGA TCACAAAGGG TCAGACGGCG CGATATCAGC TAAGCGAAGA CGACCTGTCC
GAGCATCCAA TCCTTCTGAA GCATATGGTG AAAGTACCGG GCCGAGACCG ATACGTCGAC
ATCGCCGAGC CTGCGAAATC CATGGTCCGC TTTGCCAGGC TGAACCTGCA AGATCCGTGG
CCCATGCAGG GGAAATTCGA CGTCATCTTC TGCCGCAACG TGGTGATCTA TTTCTCGACG
GAGACGCAAC AGAAATTGTG GCCCCGATTT GCGAAGGCAC TGAACCACGG CGGTCATTTG
ATGATCGGTC ATTCGGAGCG TGTCACGGGG CCGGCTCTGA CACCATTGCG ATCCGTCGGC
GTCACGCATT ATGAACTGCA AGCCCAGGGG GCAATGACAT GA
|
|---|
| Protein sequence | MNGPHMIPAV GQANGQTIGD AAFRTVARHL QEQTGIVLTD VKKGLAVSRL SRRLRALQLP
DFDAYCDVLS GPDGAAEMQE MVLLLTTNVT RFFREPHHYD ALRTQILPGL VAKAKSGGRV
RLWSAGCSSG EEAYSMAMCV LEAFPQAAPS NIRILATDID SNMITKGQTA RYQLSEDDLS
EHPILLKHMV KVPGRDRYVD IAEPAKSMVR FARLNLQDPW PMQGKFDVIF CRNVVIYFST
ETQQKLWPRF AKALNHGGHL MIGHSERVTG PALTPLRSVG VTHYELQAQG AMT
|
|---|
| |