| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2828 |
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| Symbol | |
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| ID | 3935294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2844166 |
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| End bp | 2845761 |
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| Gene Length | 1596 bp |
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| Protein Length | 531 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 637905195 |
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| Product | Sel1-like |
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| Protein accession | YP_510770 |
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| Protein GI | 89055319 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3064] Membrane protein involved in colicin uptake |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0495892 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.102237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTGC CCTCTGCCGT TCGTTCGATG TGTTTGGTCT CTGTTCTGGC CCTGGGAGCC
GGGGGCGCAT TGGCTCAAAG CGACGATGCT GCCGCAGCCG CAGAAGAGGC TGTGGCGGCC
CTTCTGGCGC TTCGGGAGCC GTCCGCCGAG GATCTGGCTG CCGCAGAGGA GGCCGCCGCC
GAGGCCCGTG CGACCGCCGT GGAGGAGGCG ACATCGGCGT TTGAGGCGCT GGCCGCAGAG
AGTGCCGCAA GGGCGGAGGC GGACGCCGCG GCGCGGGCGA CTGAAGCGGA AGCGGTGGCC
GCTGCCGAAC GGGCAGAGGC GGTGGAGAAT GCGACGTCGG CCTTTGAAGC CTTGGCGGCC
GAAAGCGCTG CGCGGGCAGA AGCGGAGGCC GCGGCACGTG CGGCCGAGGC GGAAGCTGCC
GCGGCGGCGG AGCGGGCAGA AGCGCTAGCC AGCGCAACAT CGGCGTTCGA GGCGCTGGCC
GCTGAGAGTG CAGCCCGGGC AGAAGAGGCC GCCGCAGCGG ACCGCGCCGA GGCGGTCGAG
GCCGCAAGCT CGGCCTTTGC AGCACTGGCG GAGGAAAGTG CCGCCCGTGC CGCCGAGGCC
GCTGCCGCGC AGGCCGCGCT CGATCAATGC ATTGAAATTG CGGGAGAACC CTCGGCGGAG
AACTTCCCGT CGGAGGAGGC GCAACGGGCC GCCCTCACCG CCCTGCGCGA GGCTCTGCCC
GCCTGTCGTA CGGCCGCCGA AGCGCTGCCT GACGAGGGCG CTCCCCTGTA CCATCTGGCC
ACGGCCTCTC AGGCTGCCGG ACGCCACCGC CGGGCCGTGC CGCTTTATGA GCGGGCCGCC
GAAGCGGGCG TTCCAGCGGC CTTTACGCGC CTGGGGGATT ACCACAATTT CGGCCTGCGT
CCCGTGCGCG AAGACGCAGC CCAAGCAGTT GAATTCTATA GGCAAGCCGC CGATGCAGGC
GATCCGGCAG GCATGGCGAC TTTGGCCTTC ATGTACCGCC TTGGGCGCGG CGTGGAGACA
GATACCGGCG AAATGGTGCG CCTGATGCAG ATGGCCGCCG ACGCCGGTTA CCCCTTTGCG
CAAATCAACC TCGCTCAGAC GTTCCTGCGC GGGGAGGGCG TGCTTGGGGG CGTTGATGAG
GCGCTTGGCA TTCCGGACGC GCGGCGCGCC GTGCCGTTGC TTGTCGATCT GGCGAACTCA
GGAAATACCG AGGCAATCCA GGACCTTATC CAGCTCTATT CCGACGGAGC AGAGGGCGTG
CCGCCCAGTG ATTTCCTGCG CGGCGGTTGG GTGGAGCAAC TGGCCGCCAC CGGCGATCCG
GCGGGCATCG CGGCGCGCGG GTTCCTGTAT GAACAGGGCA TTGGGCGCGG CGCCAATCCT
GAACTGGCCG CTGCCGATTA TGTCGCCGCG CTGGAGACCG GCGAGGTTGA GATAGAGGAT
ATGCGCGGCA CGATCGACGG TCGCACGCCG CCTTGGGATC AGGCCACGGC CATCGCATTC
CAGACAATTC TGGCCGAGCG TGGGCTTTAT ACGATGCGGA TCGACGGCGA TGTGGGGCCC
GGAACGCGCC GGGCCGCGCA GGGTCTAAGC GAATGA
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| Protein sequence | MSLPSAVRSM CLVSVLALGA GGALAQSDDA AAAAEEAVAA LLALREPSAE DLAAAEEAAA
EARATAVEEA TSAFEALAAE SAARAEADAA ARATEAEAVA AAERAEAVEN ATSAFEALAA
ESAARAEAEA AARAAEAEAA AAAERAEALA SATSAFEALA AESAARAEEA AAADRAEAVE
AASSAFAALA EESAARAAEA AAAQAALDQC IEIAGEPSAE NFPSEEAQRA ALTALREALP
ACRTAAEALP DEGAPLYHLA TASQAAGRHR RAVPLYERAA EAGVPAAFTR LGDYHNFGLR
PVREDAAQAV EFYRQAADAG DPAGMATLAF MYRLGRGVET DTGEMVRLMQ MAADAGYPFA
QINLAQTFLR GEGVLGGVDE ALGIPDARRA VPLLVDLANS GNTEAIQDLI QLYSDGAEGV
PPSDFLRGGW VEQLAATGDP AGIAARGFLY EQGIGRGANP ELAAADYVAA LETGEVEIED
MRGTIDGRTP PWDQATAIAF QTILAERGLY TMRIDGDVGP GTRRAAQGLS E
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