| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2827 |
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| Symbol | |
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| ID | 3935293 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2843580 |
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| End bp | 2844155 |
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| Gene Length | 576 bp |
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| Protein Length | 191 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637905194 |
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| Product | peroxidase-like |
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| Protein accession | YP_510769 |
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| Protein GI | 89055318 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00537954 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0498212 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCGCAAC CCGACCATAT CTCGATCTAT GACCTGCCGG ATTTTGACGC GCTGGATGAC
GACACGAAGC GCTATTTTGA GGTCTGCCAG GAGAAGCTTG GGATGGTGCC GAACGTGCTG
CGGACCTTCT CCGTTAACCA GGATAAACTC CGCGCGTTCG GGCAGTATTA CAACACGTTG
ATGTTGGGCG AGAGCCGGTT GAGCAAGCTG GAGCGCGAGA TGGTGGCCGT CGTCGTCTCC
TCTGCAAACC GCTGTTTCTA TTGCCTTGTG GCCCATGGAC AGGCGGTGCG GAAGCTGTCC
GGCGACCCAC AATTGGGGGA GATGCTGGTG ATGAATTACC GCGTGGCAGA GCTGCCGGAG
CGCCAGAAGG CCATGCTGGA TTTTGCATGG CGGTTAACCA CAACGCCGTC GGAGGTTGCG
GGCGATGACA GGGCACAACT GGAGGCCGCA GGCCTGACCC AGGACGAGAT CTTTGACCTG
TCGGACGTCA TCGCGTTTTT CAACATGTCC AACCGGTTTG CGATTGCGTC AGACATGATG
CCAAACCCGG AATATCACCG CATGGACCGC GCATAA
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| Protein sequence | MPQPDHISIY DLPDFDALDD DTKRYFEVCQ EKLGMVPNVL RTFSVNQDKL RAFGQYYNTL
MLGESRLSKL EREMVAVVVS SANRCFYCLV AHGQAVRKLS GDPQLGEMLV MNYRVAELPE
RQKAMLDFAW RLTTTPSEVA GDDRAQLEAA GLTQDEIFDL SDVIAFFNMS NRFAIASDMM
PNPEYHRMDR A
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