Gene Jann_2826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2826 
Symbol 
ID3935292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2841749 
End bp2843467 
Gene Length1719 bp 
Protein Length572 aa 
Translation table11 
GC content62% 
IMG OID637905193 
ProductABC transporter related 
Protein accessionYP_510768 
Protein GI89055317 
COG category[R] General function prediction only 
COG ID[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase 
TIGRFAM ID[TIGR02323] phosphonate C-P lyase system protein PhnK 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0515832 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0638843 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCCA TGTTTATGAG CCTCCTAGAA ATCGAAAACC TCACCGTCGA ATTCCCCACG 
CGGCGCGCGC TCTTCACTGC GGTGAAATCC GCCAACCTCA GCGTGGAGCC CGGCGAAATC
CACGGCCTTG TGGGTGAATC CGGTGCTGGA AAGTCCACCA TCGGGGCCGC CGTCATGGGG
CTGCTGGACA GGCCCGGGCG CATTGCGGGC GGGATCATCC GCTACAAGGG CGATGAAATT
TCGGGCCTTG ATACCGGAGC GATGCGCGCG CTTCGGGGCA AGAAGATCTC GATGATTTTC
CAGGACCCGC TGACGTCGCT GAACCCGCTC TTCACCGTCC GCCAACAGTT GGTGGAGACG
ATATCCCAAC ATCTCAACGT CACGGCGGAG GAGGCCCACA CCCGCGCCCG CGATCTGATC
GACCGTGTCG GCATCCCCGA CCCGGAGGCG CGGCTGGACC AGTACCCGCA CCAGTTCTCC
GGCGGGATGC GGCAGCGGGT GGTCATCGCA CTGGCCCTCT GCTCCGAGCC GGACGTGATC
ATCGCGGACG AGCCGACCAC CGCGCTTGAT GTGTCCATCC AGGCGCAAAT CCTTGATCTG
ATTAAGGAAT TGGCAACCGA GCGGCAAGTC GGCGTGATCC TGATCACCCA TGATATGGGC
GTGATTGCCG ACACGACCGA CAAGGTCACG GTCATGTATA TGGGCGAGGT CGTGGAATCG
GGCACCACCG CGCAGGTTCT GGGCCAGCCC CAACACGAAT ACACCAAATC CCTGATCGCC
GCCGTGCCGC GCCCCACCGT GAAGCTCCAC CGCTTCCCGC TGATCTCCTA TGGCGGGCGG
GTGATGGAAT TCGCGATTGA GGACCTCAAG CGCAATTGGC CGGAGGTGGA AACCGACCGC
CGCAAATCCC TGGTGCAGAT CGACGGCATC ACCAAACGCT TCGTTCAAAC CCGCGCAATC
CTGCCGCGCA ACCGCAAGTT ATTCACAGCT GTGGATAACG CGACGTTTGA TATCAAGCAG
GGCGAAGTCT TTGGTCTGGT TGGGGAATCT GGCTCCGGCA AATCCACCAT CGCGCGGATG
ATTGCCGGGT TATACACAGT CGATGGTGGC GAGGTTCAGT TTGACGGCAA GCCCGTCTCC
AACCAGCCCG GCGGCGTGCC GGACTGGTAT CGCAAGCAGA TCCAGATGAT TTTCCAGGAC
CCCTTCTCGT CGCTCAATCC CCGTATGCGC GTCGATGAAA TTATCGCAGA ACCCGCCCGC
CACCACGGTC TTCTGACCGG GCAGGCGCTG AGGGATCGCG TGGCGGAATT GTTGGAGCGT
GTGGGCCTGG GCGCGGCGGC GGGCGTGAAA TATCCCCATG AGTTTTCCGG TGGCCAGCGG
CAGCGCATTT CCATCGCCCG CGCGCTCGCC ACCCAGCCCA GGTTCCTGAT CTGTGATGAG
CCGACATCGG CGCTTGATGT GTCGATCCAG GCGCAGATTC TGAACATTCT CAAGGACCTG
CAAGAGCATC TTGGGCTGAC AATGCTCTTC ATCTCTCACG ATCTGCCCGT GGTCCGCCAG
ATGTGCGACC GCGTCGGCGT GATGAAGAAC GGGGAGTTGG TGGAAGTCGC CGAGACCGAG
ACGCTGTTCG CGACCCCGCA GCACCCCTAT ACTCAGGGTC TCCTCTCACT CATGCCGCGC
CTTGATGGCC TGTCCGACGA GGGGCTGTCG GTCGCCTGA
 
Protein sequence
MESMFMSLLE IENLTVEFPT RRALFTAVKS ANLSVEPGEI HGLVGESGAG KSTIGAAVMG 
LLDRPGRIAG GIIRYKGDEI SGLDTGAMRA LRGKKISMIF QDPLTSLNPL FTVRQQLVET
ISQHLNVTAE EAHTRARDLI DRVGIPDPEA RLDQYPHQFS GGMRQRVVIA LALCSEPDVI
IADEPTTALD VSIQAQILDL IKELATERQV GVILITHDMG VIADTTDKVT VMYMGEVVES
GTTAQVLGQP QHEYTKSLIA AVPRPTVKLH RFPLISYGGR VMEFAIEDLK RNWPEVETDR
RKSLVQIDGI TKRFVQTRAI LPRNRKLFTA VDNATFDIKQ GEVFGLVGES GSGKSTIARM
IAGLYTVDGG EVQFDGKPVS NQPGGVPDWY RKQIQMIFQD PFSSLNPRMR VDEIIAEPAR
HHGLLTGQAL RDRVAELLER VGLGAAAGVK YPHEFSGGQR QRISIARALA TQPRFLICDE
PTSALDVSIQ AQILNILKDL QEHLGLTMLF ISHDLPVVRQ MCDRVGVMKN GELVEVAETE
TLFATPQHPY TQGLLSLMPR LDGLSDEGLS VA