| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2825 |
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| Symbol | |
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| ID | 3935291 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2840383 |
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| End bp | 2841357 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637905192 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_510767 |
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| Protein GI | 89055316 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0712008 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.159732 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGATA CGCCCCAGAC GCCCGAGCAG CCCACCCCCG CCGTGCCCGC CGCCCGCGCG
CAATCGCGCC TCTACCGCGC GTGGGACAGT GATGTCGGCT ACGCCTTCCG TCATTCCCCC
GTGGCGCTGG TTTCGGCCAG CCTGACCGTC ATCCTGATCC TGGCGGCTGT CTTCGCGCCG
CTCATTGCCC CCTATGACCC GTTCAACCCC GCATCCCTGA ACCTGATGAA CGGGCTGACG
CCGCCCGGCA CGCCGTCGCC CTTCACCGGG GACAGCTTCA TTCTGGGCAC CGATGATCAG
GGGCGCGATG TGTTCTCCAC CATCCTCTAC GGGTTGCGGA TATCGCTGTT TGTGGGTTTT
GCAGCCGTGA CCTTCGCGCT TGTTCTGGGC GTTTCCCTTG GCCTTATTGC GGGCTATGTC
GGCGGGTGGA CCGAGACGAT CATCATGCGC ATCGCCGATA TCCAGCTGAC CTTCCCGTCG
ATCCTTGTGG CGCTGCTGAT CTCTGGCATC GCCAAGGGAG TGACCCCCAT CGAATACCGC
GATGAGATGG CGTTGTTCGT GCTGATCCTC GCCATTGGCC TGTCGGATTG GGTGCAATTC
GCACGGGTGG TGCGCGGGGC GACGCTGGTG GAAAAGAACA AGGAATACGT GCAGGCCGCC
CGCCTCATCG GGCGATCAAC ATTCGTCATC ATGGCCCGCC ACATCCTGCC CAACGTCCTA
TCACCCGTGC TGGTGATCGC CACCATTTCG CTGGCGCTGG CCATCATCGC CGAGGCAACG
CTGTCCTTCC TCGGCGTCGG TGCCCCGCCC ACGGAACCCT CCCTCGGCAC GCTGATCCGC
ATCGGCCAGA CGTTCCTGTT CTCCGGCAAA TGGTGGATCC TTGTCTTCCC CGCCGCCACG
CTCCTCGTGC TGGCACTGGC CGTAAATTTG CTCGGCGACT GGCTCCGCGA CGCGATCAAC
CCGAGGCTGC GGTGA
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| Protein sequence | MSDTPQTPEQ PTPAVPAARA QSRLYRAWDS DVGYAFRHSP VALVSASLTV ILILAAVFAP
LIAPYDPFNP ASLNLMNGLT PPGTPSPFTG DSFILGTDDQ GRDVFSTILY GLRISLFVGF
AAVTFALVLG VSLGLIAGYV GGWTETIIMR IADIQLTFPS ILVALLISGI AKGVTPIEYR
DEMALFVLIL AIGLSDWVQF ARVVRGATLV EKNKEYVQAA RLIGRSTFVI MARHILPNVL
SPVLVIATIS LALAIIAEAT LSFLGVGAPP TEPSLGTLIR IGQTFLFSGK WWILVFPAAT
LLVLALAVNL LGDWLRDAIN PRLR
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