| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2824 |
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| Symbol | |
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| ID | 3935290 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2839370 |
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| End bp | 2840386 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637905191 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_510766 |
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| Protein GI | 89055315 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.365334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.156098 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTCAGCT ATATCCTCCG CCGTGTGTTC CAATCCATCC TCGTCCTTCT GGTCGTGGGA
TTGGTGGCGT TCGCAATGTT TCGCTTCGTG GGCGATCCGG TCGACACCAT GCTGGGACAG
GAGCGCACGA TGGAAGATGT CGAGCGTCTG CGGGAGGTTC TGGGCCTCAA CAAGCCGTTC
TTCCTACAAT ACTGGGATTT TCTGGTGCGC GCCGTGCAGG GCGATTTCGG CATCTCCTAC
CGCCAGGGCC GTCCGGTGGC CGAGATCATC GCCGAACGCC TGCCCGCCAC GCTGGAACTG
GCGCTGGTCT CGGGCGTCCT CGCGCTTGGG TTCGGGATCG TTCTGGGCAT CTTCACCGCT
ATCCGGCGTG ACGGGTTCTG GGCCAATTTC ATCATGAGCG TCAGTCTTGT GGGCGTGTCG
CTGCCGACCT TCCTGATCGG TGTGCTGCTG ATCTATGCCT TTGGCGTCGG CCTCGACATC
CGCATCCCGT TTACCGACAC CACCTTCAAT ACCGGCGGCA TGCCCACCTT TGGGCGCGGC
GATACCGGAG AGATTTTTGG CTGGACCACC GGGTTCGCCA CCTGGGACGG GGTGCAGAGC
ATCATCCTGC CCGCGATCAC CCTTGGCCTT TACCAGATGA CCTTGATCAT GCGCCTTGTG
CGCGCCGAAA TGCTGGAGGT GCTGCGCGCC GATTACATCC GCTTTGCACG GGCGCGGGGC
CTGTCAGACC GGGCGATCAA CTTCCGCCAT GCCCTGAAGA ACACCATGGT ACCGGTGATC
ACGGTCACGG GTCTGCAACT GGGCTCTATC ATCGCGTTTG CGATCATCAC CGAGACGGTG
TTCCAATGGC CCGGCGTCGG GCTTCTCTTC ATCAACGCGA TCCAGTTCGT CGATATCCCC
GTGATGGCCG CCTATCTGAT GCTGATTTCC GTGATGTTCG TGGGCATCAA TCTGGCGGTG
GACCTGCTTT ATGTGGCGAT TGACCCGCGC CTGCGCGTGG ATGGGAAAAC GACATGA
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| Protein sequence | MLSYILRRVF QSILVLLVVG LVAFAMFRFV GDPVDTMLGQ ERTMEDVERL REVLGLNKPF
FLQYWDFLVR AVQGDFGISY RQGRPVAEII AERLPATLEL ALVSGVLALG FGIVLGIFTA
IRRDGFWANF IMSVSLVGVS LPTFLIGVLL IYAFGVGLDI RIPFTDTTFN TGGMPTFGRG
DTGEIFGWTT GFATWDGVQS IILPAITLGL YQMTLIMRLV RAEMLEVLRA DYIRFARARG
LSDRAINFRH ALKNTMVPVI TVTGLQLGSI IAFAIITETV FQWPGVGLLF INAIQFVDIP
VMAAYLMLIS VMFVGINLAV DLLYVAIDPR LRVDGKTT
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