Gene Jann_2823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2823 
Symbol 
ID3935289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2838367 
End bp2839158 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content66% 
IMG OID637905190 
ProductMltA-interacting MipA 
Protein accessionYP_510765 
Protein GI89055314 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3713] Outer membrane protein V 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.690808 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0866441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAACA TGACACGCAT GGCCGCCGGG ATCGCGCTGG CCCTCACCAC GGGTCTGGGG 
GGCGGCAGCT TGGCAACAAC CGCACAGGCG CAGGACTTCG GCATCTCGGG CGAGATCGGC
TTCGGGGCCC GGGTGCGGCA GGTCTATTTC GGCGCCGACG AGTATGGCCT GAGCCCGCTG
GGGCGCGGGT CACTGGAGGC CTTTACCTTC GGGCCGATCA CCTCAGGCGC GCCGGGCGTG
GCGCGCGACC GGACAGGCTT TGGCCTGCGC GGCGCGGTGC GCCTGATCCC GGGCCGCTCC
GCCACGGATT ACGCAGAGCT TGCGGGCCTA GACGACGTGG ATTTCTCGCT GGAACTGGGT
CTTGGTGCCC AATACGAGGC CGAGGCCTAC CGCGTCTTCG CCGATATCCG CTATGGCGTG
ATCGGGCATG AGGCGCTGGT CAGTGAAGTG GGCGCGGATG TGATTTTTCG CCCCACCAAT
GATCTGGAAA TCTCGGTCGG CCCGCGCTTG TTTTTCGGGT CGGACAGCTA CACCAGCACC
TATTTCGGCG TCACGGCGGC CGAGGCCGGT ATGAGCGCGT TCGATGCGTT TGATGCCGAC
GGAGGCTTGC TGTCCATGGG GCTGGACCTG CGCGTGCAAC GCCAGTTGAG CGATGATTGG
TCGATCCGTG CAGATCTTGA GATCAGCGAA TTCGTCAACG CCGCCGCCGA CAGCCCGATC
ACGGCCCAGG GCTCCACCAC CCACGCGATC TTCGGCGTGA CCCTGGCGCG CCGCTTCAGC
TTCGGGTTCT AG
 
Protein sequence
MTNMTRMAAG IALALTTGLG GGSLATTAQA QDFGISGEIG FGARVRQVYF GADEYGLSPL 
GRGSLEAFTF GPITSGAPGV ARDRTGFGLR GAVRLIPGRS ATDYAELAGL DDVDFSLELG
LGAQYEAEAY RVFADIRYGV IGHEALVSEV GADVIFRPTN DLEISVGPRL FFGSDSYTST
YFGVTAAEAG MSAFDAFDAD GGLLSMGLDL RVQRQLSDDW SIRADLEISE FVNAAADSPI
TAQGSTTHAI FGVTLARRFS FGF