Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2823 |
Symbol | |
ID | 3935289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2838367 |
End bp | 2839158 |
Gene Length | 792 bp |
Protein Length | 263 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637905190 |
Product | MltA-interacting MipA |
Protein accession | YP_510765 |
Protein GI | 89055314 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3713] Outer membrane protein V |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.690808 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0866441 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACGAACA TGACACGCAT GGCCGCCGGG ATCGCGCTGG CCCTCACCAC GGGTCTGGGG GGCGGCAGCT TGGCAACAAC CGCACAGGCG CAGGACTTCG GCATCTCGGG CGAGATCGGC TTCGGGGCCC GGGTGCGGCA GGTCTATTTC GGCGCCGACG AGTATGGCCT GAGCCCGCTG GGGCGCGGGT CACTGGAGGC CTTTACCTTC GGGCCGATCA CCTCAGGCGC GCCGGGCGTG GCGCGCGACC GGACAGGCTT TGGCCTGCGC GGCGCGGTGC GCCTGATCCC GGGCCGCTCC GCCACGGATT ACGCAGAGCT TGCGGGCCTA GACGACGTGG ATTTCTCGCT GGAACTGGGT CTTGGTGCCC AATACGAGGC CGAGGCCTAC CGCGTCTTCG CCGATATCCG CTATGGCGTG ATCGGGCATG AGGCGCTGGT CAGTGAAGTG GGCGCGGATG TGATTTTTCG CCCCACCAAT GATCTGGAAA TCTCGGTCGG CCCGCGCTTG TTTTTCGGGT CGGACAGCTA CACCAGCACC TATTTCGGCG TCACGGCGGC CGAGGCCGGT ATGAGCGCGT TCGATGCGTT TGATGCCGAC GGAGGCTTGC TGTCCATGGG GCTGGACCTG CGCGTGCAAC GCCAGTTGAG CGATGATTGG TCGATCCGTG CAGATCTTGA GATCAGCGAA TTCGTCAACG CCGCCGCCGA CAGCCCGATC ACGGCCCAGG GCTCCACCAC CCACGCGATC TTCGGCGTGA CCCTGGCGCG CCGCTTCAGC TTCGGGTTCT AG
|
Protein sequence | MTNMTRMAAG IALALTTGLG GGSLATTAQA QDFGISGEIG FGARVRQVYF GADEYGLSPL GRGSLEAFTF GPITSGAPGV ARDRTGFGLR GAVRLIPGRS ATDYAELAGL DDVDFSLELG LGAQYEAEAY RVFADIRYGV IGHEALVSEV GADVIFRPTN DLEISVGPRL FFGSDSYTST YFGVTAAEAG MSAFDAFDAD GGLLSMGLDL RVQRQLSDDW SIRADLEISE FVNAAADSPI TAQGSTTHAI FGVTLARRFS FGF
|
| |