| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2819 |
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| Symbol | |
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| ID | 3935285 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2832541 |
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| End bp | 2834130 |
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| Gene Length | 1590 bp |
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| Protein Length | 529 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637905186 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_510761 |
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| Protein GI | 89055310 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000112764 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.172306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAACC GACTATTCGC GATCACCGCG ACCCTTCTGG CCACCACGGC CATCACCGCC
ACATCGCTAT CGGCCGAGAC GCTGCGATGG GCGCGCGCCG CCGAGGCGCT GACGCTGGAT
CCGCATTCCC AGAACGAAGG GCCGACCACG ACCCTCATGC ACCAGATCTA CGACCCCCTC
ATCGTGCGCA ACATGGCCGG TGAGATGGAA CCCTCGCTCG CCACCGAATG GGCCCCGTCC
GAGGACAACC CCAACGTCTG GGTCTTCCAG ATCCGCGAAG GCGTGACCTT CCATGGCGGC
GAAAGCTTTG ACGCCTCCGA CGTCGTCTTC TCGCTCAACC GCGCGATGCA GGAGGCCTCG
AACTTCAAGG AATTGCTGTC CGGCGTCGTT GAGGTCCGCG CCACGGGTGA TTTCACCGTC
GAGATTGAAA CCGAAGGCCC CAACCCGCTG CTGGCCAACA ACCTGACCAA CATCATGATC
ATGGATGAGG GTTGGACCGT CGAAAACGGC GCTGAAAACG TGCAGGATTA TGCCGCAGGC
GAAGACACGT TCGCCGCGCG CAACGTCAAC GGCACCGGCG CATTCGTGCT GCAAAGCCGG
GAGGCTGACG TGCAGACCGT GCTGACCCAG AACCCCGATT ACTGGGGCAT CGGTCAGTTC
CCGATGGATG TGACCGAGAT CATCTTCACC CCGATCCAGA ACCCCGCCAC GCGCCTCGCG
GCCTTCCTGG GCGGCGAAGT CGACTTCATC CAGGACGTGC CTGTGCAGGA TCTGGAGCGG
GTCGAGGCCG CCGACGGCAT CGGTCTGGGC ACCGGACCGC AGAACCGCAA CATCTTCTTC
GGCCTCAATG TCGGCGCCGA TGATCTGGAG CGCGACAACG TGGACGGGGA AAACCCGCTG
GCCAATCCCA TGGTCCGGGC CGCGATGAAC CTCGCCATCA ACCGCGAGGC GATCCAGCAG
GTCGTCATGC GGGGCCAGTC CGATCCCACC GGCGCAATGC TGCCTCCGCC CGTCAACGGC
TGGACCGAGG ATCTGGAAGC CTACCCAGCC TATGACGTGG CCGCAGCCCA GGCGCTGATG
GATGAGGCAG GCTATGGCGA CGGCTTCTCG ATCCAGCTCG ATTGCCCCAA TGACCGCTAC
GTCAACGACG AATCGATCTG CCAGGCGGCC GTGGGCATGT TCGCCCAGAT CGGCATCACG
GTGAACCTGT CCGCCCTGCC CCGCGCCCAG CATTTCCCGC TGATCGCCAA TGGCGAAACG
GACCTGTACA TGCTGGGGTG GGGCGTGCCG ACATATGATT CCGAGTATGT CTTCAACTTC
CTCTACCACA CCCGCAACGA AGGCCGTGGA AGCTGGAACG GCACCGGCTT CTCCAACGCC
GCGATGGACG ACATGATCGT GTCCCTGTCG TCGGAGACGG ATCTTGAGGC CCGCGATCAG
ATCATCGCCG ATCTCTGGAC CATGGCCACC GCCGAGCAGA TCTACCTGCC CATCCACCAC
CAGGTCCTCA ACTGGGGCAT CTCCGATGCC TGGAGCACGC TGGTGGACGC CGACGATCAG
GTGAAGTTCA AGTATTTTGA ACTGAACTGA
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| Protein sequence | MTNRLFAITA TLLATTAITA TSLSAETLRW ARAAEALTLD PHSQNEGPTT TLMHQIYDPL
IVRNMAGEME PSLATEWAPS EDNPNVWVFQ IREGVTFHGG ESFDASDVVF SLNRAMQEAS
NFKELLSGVV EVRATGDFTV EIETEGPNPL LANNLTNIMI MDEGWTVENG AENVQDYAAG
EDTFAARNVN GTGAFVLQSR EADVQTVLTQ NPDYWGIGQF PMDVTEIIFT PIQNPATRLA
AFLGGEVDFI QDVPVQDLER VEAADGIGLG TGPQNRNIFF GLNVGADDLE RDNVDGENPL
ANPMVRAAMN LAINREAIQQ VVMRGQSDPT GAMLPPPVNG WTEDLEAYPA YDVAAAQALM
DEAGYGDGFS IQLDCPNDRY VNDESICQAA VGMFAQIGIT VNLSALPRAQ HFPLIANGET
DLYMLGWGVP TYDSEYVFNF LYHTRNEGRG SWNGTGFSNA AMDDMIVSLS SETDLEARDQ
IIADLWTMAT AEQIYLPIHH QVLNWGISDA WSTLVDADDQ VKFKYFELN
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