Gene Jann_2815 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2815 
Symbol 
ID3935281 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2829772 
End bp2830557 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID637905182 
Productexodeoxyribonuclease III 
Protein accessionYP_510757 
Protein GI89055306 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0879261 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.730816 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCGGA TTGCGACGTT CAATATCAAC GGGGTGAAGG CGCGCATCGG CGCGCTCGGG 
GATTGGCTGG ACGAGGCCAA GCCCGATGTC GCGCTGTTGC AGGAGATCAA ATCCGTCGAT
GAAAATTTCC CGCGAGAGAT GTTGGAAGAC CGGGGATATA CCGTGGAAAC CCATGGCCAG
AAGGGGTTTA ATGGGGTCGC GATCCTGTCC AAACTGCCGC TGGAAGATGT CAGCCGTGGG
CTGCCCGGTG ATGACACGGA TGAACAGGCC CGCTGGATTG AGGCGACGGT GATGGGCGAC
ACGCAGGCGG TGCGGGTCTG CGGCCTCTAT CTGCCCAACG GCAACCCCAC GCCGGGCCCG
AAATACGATT ACAAACTCGC CTGGATGGAG CGGATGCACC GCCACGCACA GGGCCTTCTC
GCCAGCGAAA TGCCCGTCGT CATGGCCGGG GATTACAATA TCATCCCGCA AGACGCCGAT
GCCGCCCGCC CCGAGGTCTG GCAGGACGAC GCCCTCGCCC GCTCCGAAAG CCGCGCCGCC
TTCCGCAGGC TCCTCGCGCT GGGGTTCACC GAGGCGTTTC GCGCCCGCAA TCAGGCGCCC
GGCATGTATT CCTTCTGGGA TTATCAGGCC GGTGCGTGGA ACAAGAATGA CGGCATCCGC
ATCGACCACC ACCTGCTGAG CCCAGAGGCC GCGGACCTCC TGCAGGAATG CTGGATTGAG
AAGGACGTGC GCGGCCGCGA CAAACCCTCT GACCACGTCC CCGTCTGGAT CGACCTGGCC
GCATAA
 
Protein sequence
MMRIATFNIN GVKARIGALG DWLDEAKPDV ALLQEIKSVD ENFPREMLED RGYTVETHGQ 
KGFNGVAILS KLPLEDVSRG LPGDDTDEQA RWIEATVMGD TQAVRVCGLY LPNGNPTPGP
KYDYKLAWME RMHRHAQGLL ASEMPVVMAG DYNIIPQDAD AARPEVWQDD ALARSESRAA
FRRLLALGFT EAFRARNQAP GMYSFWDYQA GAWNKNDGIR IDHHLLSPEA ADLLQECWIE
KDVRGRDKPS DHVPVWIDLA A