| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2801 |
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| Symbol | |
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| ID | 3935266 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2814008 |
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| End bp | 2814790 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 637905167 |
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| Product | RNA methyltransferase TrmH, group 3 |
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| Protein accession | YP_510743 |
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| Protein GI | 89055292 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0566] rRNA methylases |
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| TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.785043 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCAGGA AACCAACCTG GGTGATCGAT AAGGAGCGGG GAAAGCGCGC AGCGGCGGCA
GAGACCATCT GGTTATTCGG CCTGCATGCG GTGCGCGACG CGCTGGCCAA CCCGGACCGT
CAGGTTCTGC GGCTGGTGGT GTCGCTTAAC GCGCAGACCA AGCTGGCCGA TGCCATTGCC
GCGCGGGGGC TGGAGGCGGA AATTGCCGAT CCGCGCAAAT TTCCGGTGCC ACTCGACCCG
GGCTCGGTCC ATCAGGGCGC GGCGGTGGAG GTCAAGCCGT TGGATTGGGG TGACTGGCGG
GCCCTGGCGC GGGGCGATGG GGCGGAGCGG TCTGTCGTCG TGCTGCTGGA CCGGGTCAGT
GATCCGCATA ATGTGGGTGC GATCCTGCGC TCTGCCGAGG TGTTCGGCGC GCGGGCTGTG
ATCGCGCCCG CCCGCCATTC CGCACCGGAA ACGGGTGCGC TCGCCAAAAC CGCCTCCGGC
GCGCTGGAGC GGATGCCCTA TGCGCGCATC GGCAATCTGG GGGACGCGAT GGAGGCGCTG
AAGGCCGATG GCTTTTGGAT GGTCGGATTG GCAGAGGAGG GCGCGGCCCC GATCGACGCG
GTCGCCGCCC GTCACACAGA CAGCAACATC GCGTTGGTTT TGGGGGCGGA GGGACCCGGA
TTGCGGGAGC GAACCCGAGG CCTCTGCGAC GAATTGGCCA AAATCCCGTT CGCGCGCGAT
TTTGGGTCGC TCAATGTCTC AAATGCAGCC GCCGTGGCCC TATATGCCCT AACGAAAGGG
TAG
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| Protein sequence | MARKPTWVID KERGKRAAAA ETIWLFGLHA VRDALANPDR QVLRLVVSLN AQTKLADAIA
ARGLEAEIAD PRKFPVPLDP GSVHQGAAVE VKPLDWGDWR ALARGDGAER SVVVLLDRVS
DPHNVGAILR SAEVFGARAV IAPARHSAPE TGALAKTASG ALERMPYARI GNLGDAMEAL
KADGFWMVGL AEEGAAPIDA VAARHTDSNI ALVLGAEGPG LRERTRGLCD ELAKIPFARD
FGSLNVSNAA AVALYALTKG
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