Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2786 |
Symbol | |
ID | 3935250 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2803977 |
End bp | 2805422 |
Gene Length | 1446 bp |
Protein Length | 481 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637905151 |
Product | OmpA/MotB |
Protein accession | YP_510728 |
Protein GI | 89055277 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.187099 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTTACG CTCTACCGAC CCTCGCCGTC GCCAGTTTTT GTCTTGCCGC CCATGGCGCT TTGGCACAGT CGACGCCCCC GGGAACCTCG TTGACGGTTA CCGACAGCCG CGGTGCTGAC ATCGTGTTTC CGCTTGGACT TGCCTCCTTC GCGGATGCGG TGATCAGCTA CGCGCCGGGC AGTGATATCC CGAGCGAGGC CGCCCGCAAT CCCGCGCAGG TGCTGGGCTT TCCGGATTAC GCGGGTGGCG ATCAGGGTAC GTTTGTGACC CTGGGTTGCG GCGGACAGGC GGTCTGGGCG TTCACCGACA ACGCGCTGGT CGATGTCGAC GGCCCGGACC TTTGGATATT CGAAGTTGGG CCAGACGTGG AGGGGATGGC GGTGGCCGTG TCCGCCGATG GGACCACATG GCTAGACGTG GGGAGTGTTG CGGGGTCAAC CTCAACGGTG GATCTGGCCG GATATGCGCC CGCCGGGGCC AGCTATCGCT TCGTGCGCCT GACCGATGAT GGGGTGCAAT GCTCGGGCCG CACGCCGGGC GCGGATGTGG ATGCGATCGG TGCCATCGGC GCGATTGAGC GGATCGCCTT GGATCTGCCC CCGACCTCTG ACACGACGGC CTATGATGAT ACGCGTGGCA GTCAGGTGCA GTTTCCGGCA GGCGATATCA GCTTTGCCGA TGCCGTTGTC AGCTACACGC CCGGATCGAC CATTGAAGCG CCAGGCGTTG ATGACCCGTC CCTTGGTCTC CATGCTCCGG ACTATGTTGG CAATGGCGTA CCTCTGGCGG TGACCCTGGG CTGCGGCGGG CAGGTCGTGT ACCAGTTCAT CGACAACACC CTGATCGACG TGCCCGGCGC GGATCTTTTC ATTTTCGAGG TTGGTCCCGA TGTGGAGGGC ACGATCCTCG CCATTTCCGG CGATGGGGTC AGCTGGACGG ATATCGGTGC CATCGAAGGG GCGACGGCCC AGATCGACAT CGCACCCCAC ATTCAACCCG GCGAGACCTT CCAGTTCGTG CGTCTGACCG ATGGCGGCTT GCAATGCAGC GGGCGGTTCC CGGGGGCCGA CATTGATGCG GTGGGGGCAA TCGGCTCTGC CACGCGGCTG GTGCTGGACG CAAACCTGCT GTTTGATTTC GACAGCGCGA CGCTGCGTCG CGCCGGTCTT CAGGCCGTGT CCGAATTGGC CGCTGCCATC CGGTCGGGGC AGGTGTCGCA GGTCATCGTG GACGGGCACA CCGATGCGGC AGGCTCGGAC GCCTATAACC AGACCCTCTC GCAGGAGCGC GCCGTTGCGG TGGCGCAGGC GCTGATGGTG CAGGGCGTGG CGCAAGGGCT GTTGACGACG CGGGCGTTCG GAGAGAGCCG TCCGGTGGCC GACAATGGGT CGGAGGCCGG TGCACAGCAA AACCGCCGGG TCGAGGTTCT CTTGATCGGC GGCTGA
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Protein sequence | MRYALPTLAV ASFCLAAHGA LAQSTPPGTS LTVTDSRGAD IVFPLGLASF ADAVISYAPG SDIPSEAARN PAQVLGFPDY AGGDQGTFVT LGCGGQAVWA FTDNALVDVD GPDLWIFEVG PDVEGMAVAV SADGTTWLDV GSVAGSTSTV DLAGYAPAGA SYRFVRLTDD GVQCSGRTPG ADVDAIGAIG AIERIALDLP PTSDTTAYDD TRGSQVQFPA GDISFADAVV SYTPGSTIEA PGVDDPSLGL HAPDYVGNGV PLAVTLGCGG QVVYQFIDNT LIDVPGADLF IFEVGPDVEG TILAISGDGV SWTDIGAIEG ATAQIDIAPH IQPGETFQFV RLTDGGLQCS GRFPGADIDA VGAIGSATRL VLDANLLFDF DSATLRRAGL QAVSELAAAI RSGQVSQVIV DGHTDAAGSD AYNQTLSQER AVAVAQALMV QGVAQGLLTT RAFGESRPVA DNGSEAGAQQ NRRVEVLLIG G
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