Gene Jann_2780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2780 
Symbol 
ID3935244 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2796206 
End bp2796700 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content62% 
IMG OID637905145 
ProductBLUF 
Protein accessionYP_510722 
Protein GI89055271 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.648384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCT TGAGGACCAA ATTGTATCGG CTCACCTATA CAAGCTACGC AAGCCGGCTG 
TTCAACCGCA ACACCCTCTC GGCGATCACG GCTGTGTCGC GGCGCAATAA CGCGAAAACG
GATGTGACCG GGCTGTTGGT CTACCACGAC CACCGGTTCT TTCAGGTGCT GGAGGGGGAG
GAAGAGGTTC TGACCCGCCT GATGATGCGA ATCGCAAATG ATCCGCGTCA CCGATCCCTC
AACATGGTTG AGCACGGCCA GATCAAACGT CGGGCCTTCA CCACCTGGCG GGTCTTCTGC
GCAAGCCGGG ACGCGCCAAA ACTGGACGCG CCGGGCACCT TTGCCCTGAA AGATCTGATC
CCGGTCAACA GTGACCTGCG TGGCAACGAT CCGGAGGTGC GCTTACAGGT GCGCCGGTTC
CTCGCGGAGT TGCGGGATCT CCCGTCAGCC GCTGCCGCCT ACGGCGGGGG GCATGTTCGG
GTCGGGTCGC GTTAG
 
Protein sequence
MQTLRTKLYR LTYTSYASRL FNRNTLSAIT AVSRRNNAKT DVTGLLVYHD HRFFQVLEGE 
EEVLTRLMMR IANDPRHRSL NMVEHGQIKR RAFTTWRVFC ASRDAPKLDA PGTFALKDLI
PVNSDLRGND PEVRLQVRRF LAELRDLPSA AAAYGGGHVR VGSR