| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2765 |
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| Symbol | |
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| ID | 3935229 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2779944 |
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| End bp | 2781365 |
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| Gene Length | 1422 bp |
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| Protein Length | 473 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637905130 |
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| Product | UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D- alanine ligase |
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| Protein accession | YP_510707 |
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| Protein GI | 89055256 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0770] UDP-N-acetylmuramyl pentapeptide synthase |
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| TIGRFAM ID | [TIGR01143] UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.649237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTTTGT GGACTTCGGC AGACGCGGCA TCGGCCACGG GCGGCACAAG TCAGGGCACC
TGGACCGCGA CGGGTGTGTC CATCGACACC CGCACGATTG AGCCGGGCGA TCTGTTCGTG
GCCTTGGCCG CTGCCCGCGA CGGCCATGAG TTCGTTGCCC AAGCCTTTCA GAAGGGCGCG
AGCGCCGCAC TTGTTAACCA TGTTCCCGAC GGTATGGACG CCGCGAAGTG CCTCGTTGTG
GACGATGTGC TTGCCGCGTT GGAGCGGCTT GGAACGGCGG CCCGCACCCG CACGCAGGCC
AAGGTCATCG CGATCACGGG CTCTGTCGGC AAAACCACCG TGAAGGACAT GCTGAAGCAG
GCGCTGAGCG GGCAGGGTAA GATCCACGCC GCCGTCGCCT CCTACAACAA CCATTGGGGC
GTGCCGTTGA CGCTGTCGCG TATGCCCGTT GACACAGATT ATGCCGTCAT CGAGATCGGC
ATGAGTGCCC CCGGCGAAAT CGCACCACTG TCTCGCATGG CCCGGCCCCA CGTGGCGATG
ATCACGACAA TCGCGCCCGC GCATCTGGAG GCTTTCGGCC GCATCGAAGG AATTGCCGAG
GAAAAGGCGA GTATTTTCGA GGGTTTGGAA CCGGACGGCG TGGCGATTGT GCCAATGGAC
GTAGAGACGG CTCCGATCCT CGCCCGAGCC GCGGTGGCAC ATGCAGCAGA GGTTGTGACC
TTTGGCGAGG CCGAGGGCGC GGACCTGCGC CTAACCGATG TGATGCTGAG CGACGACAGC
ACCGTCATGC GGATCGCCAC CGACGAAGGG GGGCGTTTGG CGAAGCTCTC GGTCTCTGGT
CGCCACTACG CCGTCAATGC CGTGGGCGTT CTTTGCGCCG TTGCGGCCTC GGGCGCGGAT
ACGACGCAGG CGGCGATGGC ACTGTCCCAT TGGCAACCGG TGGAGGGACG CGGCCAGCGG
GAGCGCATCC AACTGAGCCG GACCGACGAC ATCGCCATCG AACTGATCGA CGACGCTTTC
AACGCCAACC CGACCTCTCT CGCAGCCGGT CTGGAGGTCC TTGCGGCGAT CACGCCGGAG
CGCGGGGGGC GGCGCATCGC CGTTTTGGGC GACATGCTGG AACTGGGGGA TGATGGCGCG
AAAATGCACG CAGATATTGC CTCACTTCCC GCGATGGAGG CGGTGGATAT CGTCCATACC
TGCGGTCCGC TGATGGTGCA TCTCGACGCG GCTTTGCCCG GTGCAAAGCG GGGGGAACAC
ACTGAAACGG CGCAAGATCT GTGCCGGGCA GTGCCGCGCA CCCTGCGTCC CGGTGACGTT
GTGCTGGTCA AGGGGTCCAA GGGCTCTCGC GTGTCGCTGG TGGTTGACGC CCTTCGGAAA
CTGGGGCAAT CGCTTGAGCG CGCAGGGCAA GGAAACCGCT AG
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| Protein sequence | MILWTSADAA SATGGTSQGT WTATGVSIDT RTIEPGDLFV ALAAARDGHE FVAQAFQKGA
SAALVNHVPD GMDAAKCLVV DDVLAALERL GTAARTRTQA KVIAITGSVG KTTVKDMLKQ
ALSGQGKIHA AVASYNNHWG VPLTLSRMPV DTDYAVIEIG MSAPGEIAPL SRMARPHVAM
ITTIAPAHLE AFGRIEGIAE EKASIFEGLE PDGVAIVPMD VETAPILARA AVAHAAEVVT
FGEAEGADLR LTDVMLSDDS TVMRIATDEG GRLAKLSVSG RHYAVNAVGV LCAVAASGAD
TTQAAMALSH WQPVEGRGQR ERIQLSRTDD IAIELIDDAF NANPTSLAAG LEVLAAITPE
RGGRRIAVLG DMLELGDDGA KMHADIASLP AMEAVDIVHT CGPLMVHLDA ALPGAKRGEH
TETAQDLCRA VPRTLRPGDV VLVKGSKGSR VSLVVDALRK LGQSLERAGQ GNR
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