| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2748 |
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| Symbol | |
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| ID | 3935212 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2763311 |
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| End bp | 2764219 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905113 |
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| Product | competence lipoprotein ComL, putative |
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| Protein accession | YP_510690 |
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| Protein GI | 89055239 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.321012 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCATCA ACCGCGTTCG TCTTTCCGGT GCGGCCCTCG GGCTGACTTT GGTCCTTGCG
GGCTGCGGCG GTGGCGGCGG AGGCAATGGT GGCCTTCTCG GAACCGGTTT GTTCAGCGGT
GGTGGAGGCG GTGGCTTCTT TGCCGGGCGC AACGCCAATG TGCCTCTGGA GCAGCTGGAT
GCCGAGACAA TCTACCAGCA GGCCGAGTTT GAGCTGGAGC GCGGTCGCGC CGACAATGCC
GCCGAGCTGT TCATCGAAGT GGAGCGTCTG CACCCCTATT CGGCCTGGGC CGAGCGTGCG
TTGATCATGG CGGCGTTCGC CTACCACGAG GATGGCGATT ATGAGGCCGC GCGCGTCGCC
GCCCAACGCT ATCTTGATTT CTACCCCGGC AATGAAGACG CGGCCTATGC GCAATATCTT
CTGGCGCTCA GCTACTATGA TCAGATCGAT CAGGTTGGCC GCGACCAGGG CGTGACCTTC
CAGGCGTTGC AGGCCCTGCG GGTGGTGATC GAACGCTATC CCGACAGCGA CTACGTCCAG
GATGCGATCT TGCGGTTCGA CCTCGCCTTT GACCATCTGG CGGGCAAGGA AATGGAAGTC
GGGCGCTATT ATCTGCGTCG GGAGCATTAC ACCTCCGCCA TCAACCGCTT CCGCGTTGTC
GTTGAAGAAT TTCAGACCAC GAGCCATACG CCCGAGGCGC TGTTGCGGCT GGTTGAGGCG
TATCTGGCCC TCGGTCTGAC CGATGAGGCG CAGACAGCCG GCGCGATCCT GGGCTACAAC
TTCCAGTCCT CACCCTTCTA CGATGATGCC TTCCGTCAAT TGACGGGGCA GGGCCTGTCG
CTGGAGGCCG CCGGTGAAAA CTGGTTGCGG GAAGTCTGGC AGCAAACGGT GCGGGGCGAC
TGGCTGTAG
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| Protein sequence | MTINRVRLSG AALGLTLVLA GCGGGGGGNG GLLGTGLFSG GGGGGFFAGR NANVPLEQLD
AETIYQQAEF ELERGRADNA AELFIEVERL HPYSAWAERA LIMAAFAYHE DGDYEAARVA
AQRYLDFYPG NEDAAYAQYL LALSYYDQID QVGRDQGVTF QALQALRVVI ERYPDSDYVQ
DAILRFDLAF DHLAGKEMEV GRYYLRREHY TSAINRFRVV VEEFQTTSHT PEALLRLVEA
YLALGLTDEA QTAGAILGYN FQSSPFYDDA FRQLTGQGLS LEAAGENWLR EVWQQTVRGD
WL
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