| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2731 |
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| Symbol | glyS |
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| ID | 3935195 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2743519 |
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| End bp | 2745738 |
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| Gene Length | 2220 bp |
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| Protein Length | 739 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637905096 |
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| Product | glycyl-tRNA synthetase subunit beta |
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| Protein accession | YP_510673 |
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| Protein GI | 89055222 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
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| TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.0985358 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGATC TTTTGCTGGA ACTCTTTTCC GAGGAAATCC CCGCCCGGAT GCAGGCGCGC
GCGAGCGCTG ATGTGAAGCG TCTGGTGACC GATGGTTTGG TCGAGGCCGG GCTGACCTAT
GCCTCCGCCG GCAGTTTCGT CACCCCCCGC CGTCTGGTCC TGACCGTGGA GGGTTTGACG
GACAACTCGC CTACAACCAC AGAAGACCGG CGTGGTCCCA AAGTTGGCGC GCCCGACAAG
GCCCTTGAAG GGTTTTTGCG TGGCGCAGGC GTCGCGCGTG AGGATCTGGA GGAGCGTGAG
GACAAAAAAG GCACTTTCTA CTACGCGAAG GTCACGTCCG AGGGCCGCGC GACGTCCGAC
ATCATCGCCG ACCTGATCCC GCAGATCGTG CGCAATTTCC CGTGGCCCAA ATCCATGCGG
TGGGGCACGG GGTCTTTGCG TTGGGTGCGT CCATTGCAGT CCATCCTGTG CCTGTTGACC
CGCGAAGATG GCTCAGACGT GGTGAATTTC GACGTGGACG GCATCGCATC CGGCAACACA
ACCGAAGGCC ACCGCTTCAT GGCGCCTGGC CGGTTTAGCG TGTCGTCGTT CGATGATTAC
TCTGCCAAAC TGCGCGCGGC CAAGGTGGTT CTGTCGCCGC AGGACCGGTC TGACGCGATC
TGGCACGACG CCACCAATAT GGCCTTCGCG GCGGGGTTGG AGGTTGTTGA AGACGCGGGC
CTACTGACGG AGGTTGCGGG CCTCGTGGAA TGGCCCGTTG TGTTGATGGG AGAGATCGCC
GAGGGTTTCT TGGGCCTGCC CGCGGAGGTC CTGCAAACCT CCATGCGCGA ACACCAGAAG
TTTTTCTCGG TCCGCAACCC GGCAACGGGC CGGATCGAAC GGTTTATCAC CGTGGCGAAC
CGGGAGACGG CGGACGAGGG CGCTACCATC CTCGCGGGGA ATTCCAAGGT GCTGTCCGCG
CGTTTGGCGG ACGGGAAATT CTTCTGGGAC AACGACCTGC GCATCGCCCG TGATGGTATG
GGTGCATGGC GCAAGGCATT GGAAAACGTG ACGTTCGAGC GGCGCTTGGG ATCACAGGCC
GAACGTGTCG AGCGTATCGC GACCCTCGCC CTAGAGATAG CCCCCATGGT CGGCGCGGAC
CCGACGGCGG CGGAAACCGC TGCGCGGATC GCCAAGGCGG ATCTGTCGTC CGAGATGGTC
TACGAGTTCC CCGAATTGCA AGGCACGATG GGCAAATACT ACGCGTTGGA AGCGGGCCTC
GACCCGGCGA TTGCCGCCGT GGCCGAAGAC CACTACGCGC CTTTGGGCCC GACCGATAAT
GTTCCCACGG CGCCTTTGAG TATTGCGGTG GCATTGGCTG ACAAACTTGA CCTGCTGACA
GGCTTCTGGG CGATTGATGA GAAGCCAACC GGCTCTAAAG ATCCGTTTGC GTTGAGGCGT
GCGGCGCTGG GGGTTATCCG GATTGTTTTG GATGGTGGTT TGCGAGTGAG ACTAGACCGG
CTCTTCGATA TGCAACTTGT CGTGCACAAG GGGGCGATTA TCGACCCAAT AGACCGCGAT
GAAGTTGCTG AACTTGTCCG AGAAATCGCA AATCATGGGG TATTTGGGGC GGCTTGGAAG
GCAGTGAAAG AGTCGCGAGG CGGGCTCCCG TCATCCGGCT TTATTGAGAT GAAAGAACAA
GTTCCTGACA AATCTGATGA TCTCCTCGCC TTCTTCCACG ACCGCCTCAA AGTTCATCTC
AAGGCCGAGA ACATCCGCCA CGACGTCATT GACGCCGCCC TCTCCATGCC ATCCAACGAC
GACCTCAGCC TCGTCGTGGC CCGTGCCCGC GCGCTGCAAG CCTTCCTCGA CACGCCCGAC
GGCGAAAACC TGATCCAGGG TTACAAACGC TCCGCCAACA TCCTCGCCCA GGCCGAGGCC
AAGGACGGCG TTGAATACCG CTATGGCGCG GACGTGAAAT ATGCCGAAAC CGATGAAGAA
CGCGCGCTCT TCACCGCTCT GGACGTGGCG CGGACAGCCA TTGCGCCCGC ATTGGCCGAG
GAGCGGTTTG AGGAAGCGAT GACCGAAATG GCGAAACTCC GCGCACCCAT TGATGCGTTC
TTTGAAGCTG TTCAAGTCAA CGCCGACAAT GATATTGTAC GGCGCAACAG GCTGAATTTG
CTCAATGATA TTGCTCAGAC CTGTGGGGCC GTTGCGGACT TGACCAGGAT CGAAGGCTGA
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| Protein sequence | MPDLLLELFS EEIPARMQAR ASADVKRLVT DGLVEAGLTY ASAGSFVTPR RLVLTVEGLT
DNSPTTTEDR RGPKVGAPDK ALEGFLRGAG VAREDLEERE DKKGTFYYAK VTSEGRATSD
IIADLIPQIV RNFPWPKSMR WGTGSLRWVR PLQSILCLLT REDGSDVVNF DVDGIASGNT
TEGHRFMAPG RFSVSSFDDY SAKLRAAKVV LSPQDRSDAI WHDATNMAFA AGLEVVEDAG
LLTEVAGLVE WPVVLMGEIA EGFLGLPAEV LQTSMREHQK FFSVRNPATG RIERFITVAN
RETADEGATI LAGNSKVLSA RLADGKFFWD NDLRIARDGM GAWRKALENV TFERRLGSQA
ERVERIATLA LEIAPMVGAD PTAAETAARI AKADLSSEMV YEFPELQGTM GKYYALEAGL
DPAIAAVAED HYAPLGPTDN VPTAPLSIAV ALADKLDLLT GFWAIDEKPT GSKDPFALRR
AALGVIRIVL DGGLRVRLDR LFDMQLVVHK GAIIDPIDRD EVAELVREIA NHGVFGAAWK
AVKESRGGLP SSGFIEMKEQ VPDKSDDLLA FFHDRLKVHL KAENIRHDVI DAALSMPSND
DLSLVVARAR ALQAFLDTPD GENLIQGYKR SANILAQAEA KDGVEYRYGA DVKYAETDEE
RALFTALDVA RTAIAPALAE ERFEEAMTEM AKLRAPIDAF FEAVQVNADN DIVRRNRLNL
LNDIAQTCGA VADLTRIEG
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