Gene Jann_2719 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2719 
Symbol 
ID3935183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2727224 
End bp2727679 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content61% 
IMG OID637905084 
Producthypothetical protein 
Protein accessionYP_510661 
Protein GI89055210 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1463] ABC-type transport system involved in resistance to organic solvents, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.46934 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGATA CTGAGTATTC ATTCGCGGAA ATTGCCACCG GCGGGGTCGT GTTTGCCGCC 
GCCATCGGCT TTTTCGACTA TGCGTCGGGA TCTGGCGCCG CGACGTCGGC GGAGCGCTAC
GAATTGCAGG CCACGTTCCA ATCCGCCGAA GGGATCGGCA TCGGCACGGA GGTGCGTCTG
GGTGGGGTGC AGATCGGCAC CGTGACCGGG ATGGCGCTGA ACCCTGAAAC TTTCCTGGCG
GAGACGACGT TTTCCGTGTC CAACGCCATT GCCCTGCCCG ATGACACCGC GATCTCCATC
GCATCTGAAA GCCTGCTAGG TGGGTCCTAC GTGGAGATTA TTCCCGGCAC TTCACCGTTC
AATCTGGAGG CGGGTGGCGA GATCCTGGAC ACCCAATCCT CGGTCGGCCT GGCCACGCTA
TTATTACGGT TTGTGAGCGG AGCGGCAGAC AATTGA
 
Protein sequence
MADTEYSFAE IATGGVVFAA AIGFFDYASG SGAATSAERY ELQATFQSAE GIGIGTEVRL 
GGVQIGTVTG MALNPETFLA ETTFSVSNAI ALPDDTAISI ASESLLGGSY VEIIPGTSPF
NLEAGGEILD TQSSVGLATL LLRFVSGAAD N