Gene Jann_2718 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2718 
Symbol 
ID3935182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2726673 
End bp2727227 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content62% 
IMG OID637905083 
Producthypothetical protein 
Protein accessionYP_510660 
Protein GI89055209 
COG category[S] Function unknown 
COG ID[COG4765] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.225561 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGACACG TTGTATCAGC GCTGATCTTC GCCGGCCTTG CTTGCGCCAT GCCCCTTGCC 
GCGCAGCAAT TCGATGTTAT CGACGGCGTC GGAGGGTTTG ATGGATTCGA GCTTGATATG
GGCGACGAGG ACGGCACGGG CCTGACCCTG TCGGAGGGGG CAGATACCGG CGATATCCAG
TTAAACCTGG GCACCGGGGC GGCAGGCACG TTCGAGACAT TCCCTGGCGT GACGGGCCCT
GTGACCTCCA TCAGCCAGCC CGCGACGGAG GTTGGGACGA CCGTCTCGCT CCGCGCGCTC
GACAAGATGT TGGGGCAACC CACGGATATC GAGCTGTCGA TGGGTCAGAC AGTGGTCTTT
GGCCGTGTCG CGATCCGGGT GATCGAATGC CGCTATCCCG CCGCAGACCC GGGCGGCGAT
GCCTTTGCGC TGCTTGAGGT GCTGAATATG GAAGGCGAGA CGCTTTTTGA CGGATGGATG
ATCGCGTCCA GCCCGGCCCT GAATGCGTTG GAGCATTCCC GCTACGACGT CTGGGTTTTG
GGCTGTTCGG CGTAA
 
Protein sequence
MRHVVSALIF AGLACAMPLA AQQFDVIDGV GGFDGFELDM GDEDGTGLTL SEGADTGDIQ 
LNLGTGAAGT FETFPGVTGP VTSISQPATE VGTTVSLRAL DKMLGQPTDI ELSMGQTVVF
GRVAIRVIEC RYPAADPGGD AFALLEVLNM EGETLFDGWM IASSPALNAL EHSRYDVWVL
GCSA