Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2712 |
Symbol | |
ID | 3935176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2720807 |
End bp | 2722111 |
Gene Length | 1305 bp |
Protein Length | 434 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637905077 |
Product | dihydropyrimidine dehydrogenase |
Protein accession | YP_510654 |
Protein GI | 89055203 |
COG category | [C] Energy production and conversion [F] Nucleotide transport and metabolism |
COG ID | [COG0167] Dihydroorotate dehydrogenase [COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain |
TIGRFAM ID | [TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.462922 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.632693 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACC TGACCTCCAA CTTCATCGGC ATCACTTCGC CCAACCCCTT CTGGCTCGCC TCCGCGCCGC CGACGGACAA GGAATACAAC GTCCGCCGCG CGTTTGAGGC GGGCTGGGGT GGCGTCGTCT GGAAAACGCT CGGCTCAGAG GGTCCGCCGG TGGTGAACGT CAATGGCCCC CGGTACGGTG CGATCTACGG CGCGGACCGT CGGCTTCTGG GCCTCAACAA TATCGAGCTG ATCACCGACC GGGACCTCTA CACCAACCTG GAAGAGATCA AGCGCGTGAA GGCAGACTAC CCCGACCGCG CGATCATCGT CTCCATCATG GTGCCGTGCG AGGAGGCGGC GTGGAAAGCC ATCCTGCCGC TGGTGGAAGA CACCGGCGCC GACGGGATCG AGCTAAATTT CGGCTGCCCC CACGGCATGT CCGAGCGCGG CATGGGCGCG GCCGTGGGCC AGGTCCCCGA ATACATCGAA ATGGTGACGC GCTGGTGCAA GCAATATTAC TCCAAGCCCG TCATTGTGAA GCTGACGCCC AACATCACGG ACATCACCAA ACCGGCGGCG GCGGCCAAGC GGGGCGGGGC GGATGCGGTG TCTTTGATCA ACACGATCAA CTCGATCACA TCGGTCAATC TGGACACAAT GTCGCCCGAG CCGTCGATTG ACGGGAAAGG ATCGCACGGC GGCTATTGCG GCCCGGCGGT GAAACCCATT GCCATGTCCA TGGTGTCCGA GATTGCGCGC AGCCCGGAAA CCCACGGCCT GCCAATCAGC GGCATCGGCG GTGTCACCAC CTGGCGCGAC GCGGCGGAGT TCATGACGCT GGGGGCGGGC AACGTGCAGG TCTGCACGGC GGCAATGACC TACGGGTTCA AGATCGTAGA AGAAATGATC TCGGGCCTGT CGCAGTTTCT GGACGAGAAG GGCATGACAC TGGATGATCT GGTGGGCCGT GCGGTGCCGA ATGTCACGGA TTGGCAGTAC CTGAACCTCA ATTACGTCGC GAAAGCGCAG ATCAATCAGG ATGATTGCAT CAAATGCGGG CGCTGCTATG CGGCCTGCGA AGACACGTCT CACCAGGCAA TCTCCATGTC CGCCGATCGC GTGTTCGAGG TGATCGACGC CGAATGCGTC GCCTGCAACC TTTGCGTGAA CGTCTGCCCG GTGGAAAACT GCATCACCAT GGTGGAAATG GACGCCGGAG AGGTCGATCC ACGCACCGGC AAACCCGTGG AGCCGGACTA TGCCAACTGG ACCACGCACC CCAACAATCC GGGCCGTGTC GAGGCGGCGG AATGA
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Protein sequence | MADLTSNFIG ITSPNPFWLA SAPPTDKEYN VRRAFEAGWG GVVWKTLGSE GPPVVNVNGP RYGAIYGADR RLLGLNNIEL ITDRDLYTNL EEIKRVKADY PDRAIIVSIM VPCEEAAWKA ILPLVEDTGA DGIELNFGCP HGMSERGMGA AVGQVPEYIE MVTRWCKQYY SKPVIVKLTP NITDITKPAA AAKRGGADAV SLINTINSIT SVNLDTMSPE PSIDGKGSHG GYCGPAVKPI AMSMVSEIAR SPETHGLPIS GIGGVTTWRD AAEFMTLGAG NVQVCTAAMT YGFKIVEEMI SGLSQFLDEK GMTLDDLVGR AVPNVTDWQY LNLNYVAKAQ INQDDCIKCG RCYAACEDTS HQAISMSADR VFEVIDAECV ACNLCVNVCP VENCITMVEM DAGEVDPRTG KPVEPDYANW TTHPNNPGRV EAAE
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