Gene Jann_2712 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2712 
Symbol 
ID3935176 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2720807 
End bp2722111 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content62% 
IMG OID637905077 
Productdihydropyrimidine dehydrogenase 
Protein accessionYP_510654 
Protein GI89055203 
COG category[C] Energy production and conversion
[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase
[COG1149] MinD superfamily P-loop ATPase containing an inserted ferredoxin domain 
TIGRFAM ID[TIGR01037] dihydroorotate dehydrogenase (subfamily 1) family protein 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.462922 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.632693 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC TGACCTCCAA CTTCATCGGC ATCACTTCGC CCAACCCCTT CTGGCTCGCC 
TCCGCGCCGC CGACGGACAA GGAATACAAC GTCCGCCGCG CGTTTGAGGC GGGCTGGGGT
GGCGTCGTCT GGAAAACGCT CGGCTCAGAG GGTCCGCCGG TGGTGAACGT CAATGGCCCC
CGGTACGGTG CGATCTACGG CGCGGACCGT CGGCTTCTGG GCCTCAACAA TATCGAGCTG
ATCACCGACC GGGACCTCTA CACCAACCTG GAAGAGATCA AGCGCGTGAA GGCAGACTAC
CCCGACCGCG CGATCATCGT CTCCATCATG GTGCCGTGCG AGGAGGCGGC GTGGAAAGCC
ATCCTGCCGC TGGTGGAAGA CACCGGCGCC GACGGGATCG AGCTAAATTT CGGCTGCCCC
CACGGCATGT CCGAGCGCGG CATGGGCGCG GCCGTGGGCC AGGTCCCCGA ATACATCGAA
ATGGTGACGC GCTGGTGCAA GCAATATTAC TCCAAGCCCG TCATTGTGAA GCTGACGCCC
AACATCACGG ACATCACCAA ACCGGCGGCG GCGGCCAAGC GGGGCGGGGC GGATGCGGTG
TCTTTGATCA ACACGATCAA CTCGATCACA TCGGTCAATC TGGACACAAT GTCGCCCGAG
CCGTCGATTG ACGGGAAAGG ATCGCACGGC GGCTATTGCG GCCCGGCGGT GAAACCCATT
GCCATGTCCA TGGTGTCCGA GATTGCGCGC AGCCCGGAAA CCCACGGCCT GCCAATCAGC
GGCATCGGCG GTGTCACCAC CTGGCGCGAC GCGGCGGAGT TCATGACGCT GGGGGCGGGC
AACGTGCAGG TCTGCACGGC GGCAATGACC TACGGGTTCA AGATCGTAGA AGAAATGATC
TCGGGCCTGT CGCAGTTTCT GGACGAGAAG GGCATGACAC TGGATGATCT GGTGGGCCGT
GCGGTGCCGA ATGTCACGGA TTGGCAGTAC CTGAACCTCA ATTACGTCGC GAAAGCGCAG
ATCAATCAGG ATGATTGCAT CAAATGCGGG CGCTGCTATG CGGCCTGCGA AGACACGTCT
CACCAGGCAA TCTCCATGTC CGCCGATCGC GTGTTCGAGG TGATCGACGC CGAATGCGTC
GCCTGCAACC TTTGCGTGAA CGTCTGCCCG GTGGAAAACT GCATCACCAT GGTGGAAATG
GACGCCGGAG AGGTCGATCC ACGCACCGGC AAACCCGTGG AGCCGGACTA TGCCAACTGG
ACCACGCACC CCAACAATCC GGGCCGTGTC GAGGCGGCGG AATGA
 
Protein sequence
MADLTSNFIG ITSPNPFWLA SAPPTDKEYN VRRAFEAGWG GVVWKTLGSE GPPVVNVNGP 
RYGAIYGADR RLLGLNNIEL ITDRDLYTNL EEIKRVKADY PDRAIIVSIM VPCEEAAWKA
ILPLVEDTGA DGIELNFGCP HGMSERGMGA AVGQVPEYIE MVTRWCKQYY SKPVIVKLTP
NITDITKPAA AAKRGGADAV SLINTINSIT SVNLDTMSPE PSIDGKGSHG GYCGPAVKPI
AMSMVSEIAR SPETHGLPIS GIGGVTTWRD AAEFMTLGAG NVQVCTAAMT YGFKIVEEMI
SGLSQFLDEK GMTLDDLVGR AVPNVTDWQY LNLNYVAKAQ INQDDCIKCG RCYAACEDTS
HQAISMSADR VFEVIDAECV ACNLCVNVCP VENCITMVEM DAGEVDPRTG KPVEPDYANW
TTHPNNPGRV EAAE