| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2703 |
|---|
| Symbol | |
|---|
| ID | 3935167 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2713651 |
|---|
| End bp | 2714469 |
|---|
| Gene Length | 819 bp |
|---|
| Protein Length | 272 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637905068 |
|---|
| Product | ABC transporter related |
|---|
| Protein accession | YP_510645 |
|---|
| Protein GI | 89055194 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.314887 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.244414 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCAAGC AGCCTAGTGG AAAAAGTGTC TTGAACACCA CAACATCCGT CATCCAAGCC
CAATCCCTTG ACCTCACGTT TCAGACGAAT GACGGGCCTG TGCAGGCGCT GTCTGATGTT
TCGCTCGATA TCGATAAGGG CGATTTCGTC TCGTTCATCG GCCCGTCTGG CTGTGGCAAG
ACGACGTTTC TGCGGGTCAT TGCGGCGCTG GAGCAGCCCA CCGGCGGTCA AGTGACCGTT
AACGGTTTAA GCCCCGATGA GGCCCGCCGT GCGCGCGCTT ATGGGTACGT GTTTCAGGCC
GCTGGCCTCT ACCCGTGGCG GACGATTGAG AAGAATATCA AGCTGCCCCT CGAGATCATG
GGATACTCCG CAAAAGACCA GCAGGATCGC GTGAACGACG TCTTGCAACT CGTTGACTTG
GAAGGGTTTG GGAAGAAGTT TCCCTGGCAA CTCTCAGGCG GAATGCAGCA ACGCGCTTCC
ATCGCGCGGG CGCTCGCGTT CGATGCCGAT ATCCTGCTGA TGGACGAGCC GTTTGGCGCG
TTGGATGAGA TTGTGCGCGA CCGTCTCAAC GAGGAACTTC TTAAGCTTTG GGCGCGGACG
GAGAAGACGA TTGGCTTCGT CACCCACTCC ATTCCTGAGG CCGTTTACCT CTCTACCAAG
ATCGTTGTTA TGTCGCCGCG TCCGGGGCGG ATCACCGATG TGATCGAGAG CGATCTACCA
AAGGACCGCC CCCTCGATAT TCGCGACACG CCGGAGTTTC TGGCGCTGGC CCATAGGGTG
CGTGAGGGGC TGCGGGAGGG GCATGCCTAT GACGAGTGA
|
|---|
| Protein sequence | MTKQPSGKSV LNTTTSVIQA QSLDLTFQTN DGPVQALSDV SLDIDKGDFV SFIGPSGCGK
TTFLRVIAAL EQPTGGQVTV NGLSPDEARR ARAYGYVFQA AGLYPWRTIE KNIKLPLEIM
GYSAKDQQDR VNDVLQLVDL EGFGKKFPWQ LSGGMQQRAS IARALAFDAD ILLMDEPFGA
LDEIVRDRLN EELLKLWART EKTIGFVTHS IPEAVYLSTK IVVMSPRPGR ITDVIESDLP
KDRPLDIRDT PEFLALAHRV REGLREGHAY DE
|
|---|
| |