Gene Jann_2696 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2696 
Symbol 
ID3935160 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2706847 
End bp2708169 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content71% 
IMG OID637905061 
ProductXRE family transcriptional regulator 
Protein accessionYP_510638 
Protein GI89055187 
COG category[R] General function prediction only 
COG ID[COG3800] Predicted transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0198087 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.635331 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACC CAACATTGCC CCCCGATGAC CACCTGACCG GCAGCCGGAT TCGTGAGCGG 
CGGCTGGCGA TGGGGCTTAA ACAGGGGGTC CTGGCGGAGA TTGTTGGCGT CTCCCCCTCC
TACCTCAACC TGATCGAGCA CAACCATCGC AAGATTGGCG GCAAGCTGTT GCTGGCGTTG
GCGCGGGCGT TGGAGGTGGA GGCCTCGGCC CTGACCGAGG GGGTGGATGC GGGGATCAGC
GAGTTGCTGG ATGCCGCCGC GCGCGCCTTG GGCGATGTCC CGGCAGAGAC GGCGCGGGTG
GATGAGCTGG TGGCCCGCTT CCCCGGCTGG ACCGCATTGA TTGCCGCACA AGAGACCCGC
GCGCGCAATC TGGAAGCCCA GATCGAGGCG CTGCGCGACC GCCTGGCCCA TGACCCGGCC
CTGGCGGAGG CGATGCATGA GGTGCTGTCA TCGGTGGCGG CGATCCGAAC CACGGCGGAT
ATTCTGGTGC GCGAGGCTGA TCTGGATCCG GCCTGGCGCG GGCGGTTCCA CCGCAACCTG
CATGAGGATG CGGAGCGGCT GTCATCGCGG GCTACGGGGT TGTTGGCGCA GTTCGAGGCC
CCGGGGGCGG GCGCGGATGT GTCGGCCCCG GAGGAAACGG TCGAGGCGAT GTTCGAGGCG
GCGGGGCATT ACTTTGCGGA GATCGAGCAG GACGGCGCGG ATGCGGTCGC GGCGGTGCTG
GCGCGCAGTG CCGGGATGGA GGACGGGCCT GCGAGATCCA GGGCGGAGGT GCGGCTGCGG
GTCTACGCGG ATGATGCAAA GCGCCTGCCG ATGGCAACCT TTGCGCCGAG GGCAAAGGCT
GTGGGCTACG ATCCGGCCCG GCTTGTCGAG CATGCCGCGG GCGATGTGGC ACTGGTGCTG
CGGCGCATGG CGAGCCTTCC GGCAGATGCG GGTCCGCCGC CCTGCGGGTT GGCGATTTGC
GACGCCTCGG GCGCGATGCT GCACCGGCGC GGGCTGCAGG GCTTTGCGAT GCCGCGCGTG
GCGGCGGGCT GCCCGCTCTG GCCGCTCTAC CGGGTGTTGG GGCGCGTGGG ACAGGCTGAC
ATGGCCATCG TCGAGACGCC CCAGGGCGCG CGGTTCAAGA CCTGGGCGGT GGCGCAACCG
GTGGCGCAGG GACAGGTGTT CGGGGCGGTG CCGCGGGTGG AGGCCACGAT GCTGGTGATG
CCGGCAGGGT CGGCATTGGC CGGAGAGGGG GCCGGTGGAG AGGGGGCAGG GGCCTTGGAG
GTGATTGCCG GCGGCCCGGG ATGCGGGACC TGCCCAAGGG CGGCATGCGC GGCGCGGCGA
TAG
 
Protein sequence
MADPTLPPDD HLTGSRIRER RLAMGLKQGV LAEIVGVSPS YLNLIEHNHR KIGGKLLLAL 
ARALEVEASA LTEGVDAGIS ELLDAAARAL GDVPAETARV DELVARFPGW TALIAAQETR
ARNLEAQIEA LRDRLAHDPA LAEAMHEVLS SVAAIRTTAD ILVREADLDP AWRGRFHRNL
HEDAERLSSR ATGLLAQFEA PGAGADVSAP EETVEAMFEA AGHYFAEIEQ DGADAVAAVL
ARSAGMEDGP ARSRAEVRLR VYADDAKRLP MATFAPRAKA VGYDPARLVE HAAGDVALVL
RRMASLPADA GPPPCGLAIC DASGAMLHRR GLQGFAMPRV AAGCPLWPLY RVLGRVGQAD
MAIVETPQGA RFKTWAVAQP VAQGQVFGAV PRVEATMLVM PAGSALAGEG AGGEGAGALE
VIAGGPGCGT CPRAACAARR