Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2696 |
Symbol | |
ID | 3935160 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2706847 |
End bp | 2708169 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 637905061 |
Product | XRE family transcriptional regulator |
Protein accession | YP_510638 |
Protein GI | 89055187 |
COG category | [R] General function prediction only |
COG ID | [COG3800] Predicted transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0198087 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.635331 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACC CAACATTGCC CCCCGATGAC CACCTGACCG GCAGCCGGAT TCGTGAGCGG CGGCTGGCGA TGGGGCTTAA ACAGGGGGTC CTGGCGGAGA TTGTTGGCGT CTCCCCCTCC TACCTCAACC TGATCGAGCA CAACCATCGC AAGATTGGCG GCAAGCTGTT GCTGGCGTTG GCGCGGGCGT TGGAGGTGGA GGCCTCGGCC CTGACCGAGG GGGTGGATGC GGGGATCAGC GAGTTGCTGG ATGCCGCCGC GCGCGCCTTG GGCGATGTCC CGGCAGAGAC GGCGCGGGTG GATGAGCTGG TGGCCCGCTT CCCCGGCTGG ACCGCATTGA TTGCCGCACA AGAGACCCGC GCGCGCAATC TGGAAGCCCA GATCGAGGCG CTGCGCGACC GCCTGGCCCA TGACCCGGCC CTGGCGGAGG CGATGCATGA GGTGCTGTCA TCGGTGGCGG CGATCCGAAC CACGGCGGAT ATTCTGGTGC GCGAGGCTGA TCTGGATCCG GCCTGGCGCG GGCGGTTCCA CCGCAACCTG CATGAGGATG CGGAGCGGCT GTCATCGCGG GCTACGGGGT TGTTGGCGCA GTTCGAGGCC CCGGGGGCGG GCGCGGATGT GTCGGCCCCG GAGGAAACGG TCGAGGCGAT GTTCGAGGCG GCGGGGCATT ACTTTGCGGA GATCGAGCAG GACGGCGCGG ATGCGGTCGC GGCGGTGCTG GCGCGCAGTG CCGGGATGGA GGACGGGCCT GCGAGATCCA GGGCGGAGGT GCGGCTGCGG GTCTACGCGG ATGATGCAAA GCGCCTGCCG ATGGCAACCT TTGCGCCGAG GGCAAAGGCT GTGGGCTACG ATCCGGCCCG GCTTGTCGAG CATGCCGCGG GCGATGTGGC ACTGGTGCTG CGGCGCATGG CGAGCCTTCC GGCAGATGCG GGTCCGCCGC CCTGCGGGTT GGCGATTTGC GACGCCTCGG GCGCGATGCT GCACCGGCGC GGGCTGCAGG GCTTTGCGAT GCCGCGCGTG GCGGCGGGCT GCCCGCTCTG GCCGCTCTAC CGGGTGTTGG GGCGCGTGGG ACAGGCTGAC ATGGCCATCG TCGAGACGCC CCAGGGCGCG CGGTTCAAGA CCTGGGCGGT GGCGCAACCG GTGGCGCAGG GACAGGTGTT CGGGGCGGTG CCGCGGGTGG AGGCCACGAT GCTGGTGATG CCGGCAGGGT CGGCATTGGC CGGAGAGGGG GCCGGTGGAG AGGGGGCAGG GGCCTTGGAG GTGATTGCCG GCGGCCCGGG ATGCGGGACC TGCCCAAGGG CGGCATGCGC GGCGCGGCGA TAG
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Protein sequence | MADPTLPPDD HLTGSRIRER RLAMGLKQGV LAEIVGVSPS YLNLIEHNHR KIGGKLLLAL ARALEVEASA LTEGVDAGIS ELLDAAARAL GDVPAETARV DELVARFPGW TALIAAQETR ARNLEAQIEA LRDRLAHDPA LAEAMHEVLS SVAAIRTTAD ILVREADLDP AWRGRFHRNL HEDAERLSSR ATGLLAQFEA PGAGADVSAP EETVEAMFEA AGHYFAEIEQ DGADAVAAVL ARSAGMEDGP ARSRAEVRLR VYADDAKRLP MATFAPRAKA VGYDPARLVE HAAGDVALVL RRMASLPADA GPPPCGLAIC DASGAMLHRR GLQGFAMPRV AAGCPLWPLY RVLGRVGQAD MAIVETPQGA RFKTWAVAQP VAQGQVFGAV PRVEATMLVM PAGSALAGEG AGGEGAGALE VIAGGPGCGT CPRAACAARR
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