| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2693 |
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| Symbol | |
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| ID | 3935157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2703070 |
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| End bp | 2705751 |
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| Gene Length | 2682 bp |
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| Protein Length | 893 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637905058 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_510635 |
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| Protein GI | 89055184 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0591] Na+/proline symporter
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.194917 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAGCC TCGACGGTCT TGTCATAATC TGCGTGCTCT ACGTTCTGGG CCTGTTCGCG
ATTGCCTTCT GGGCCGAGAA AAGCGCGGCC AAGGGCGGCG CGGGTTGGCT CAACTCGCCC
ATCACCTACA CGCTGTCGCT GTCCATATAC GCCACGGCCT GGACGTTCTA TGGCGCGGTG
GGATCAGCGG CGCGATCCGG CCTGGAATTC CTGACGATCT ACTTGGGCCC GACGCTGATG
TTTGTGGGCT GGTTCTGGCT GCTGCGCAAA GTGGTGCGGA TCGGGCGGGC GCAGCGGATC
ACATCCGTCG CCGACATGAT CTCCTCTCGC TATGGCAAAT CGGGGGGGCT GGCGGCGTTG
GTGACGCTTC TCGCGGTGGT CGGCACGACG CCCTACATCG CCTTGCAGCT CCAATCTGTG
ACGCTGTCGT TTTCCGTCTT CGCGCAGCCC GGCGCGTTTG GATCCGCGAA CACCGATAGC
ACGGCGGTCT GGCTGGCCTT TGGCCTGGCC GTATTCACTA TCATCTTCGG CACACGGTCC
CTGGACCTGA ACGAGCGCCA CCCCGGCCTT GTCAGCGCCA TCGCCTGCGA AGCCGTCGTG
AAACTGGCCG CCATCCTTGC GGTGGGCGTC TTTGTCGTCT GGGGCGTGGC CGATGGGCCC
GGGGACATGC TGGCGCGGAT CGAGGCCAGC ACGATCGCGC GTGAGCCGGT GAATGGCGCG
CGCTGGTTGG GCCTGACGGT GCTGGCAGGC GCGGCGATCT TGTGCCTGCC GCGCATGTTT
CAGGTGCTGG TGGTGGAGAA TTCGGACGAG CGGCATCTGG CCGTGGCCGG GTGGGCCTTT
CCGCTGTACC TGATGTTGAT CTCGCTTTTT GTGGTGCCCA TCGCCGTGGC GGGGATGAGC
TTGCCGGGTA CCGGCGACAA CCCGGACCTT TACGTTCTGA CCGTGCCGCT GTCACTGGAT
CAGGACGCGC TGGCGCTTCT GGTGTTTCTG GGCGGGTTTT CGGCGGCCAC ATCCATGGTG
ATCGTGGCGG CGCTGGCCCT GTCGACGATG GTGTCCAACC ACATCGTCGT GCCGCTGTGG
CTCTGGATCG GCCCGAGCGG CGACGCGATG GGCGGTGATA TGCGCAGGGT GGCGTTGATG
GCGCGCCGGG TGTCCATCGC GGGCGTGCTG GCTCTGGGTC TGATGTATTA TCGCCAGTCC
GGGGGCACGG CGGCCCTGGC GTCCATCGGC CTGATCTCCT TTTTGGGCGT GGCGCAGGTC
CTGCCTGCGT TGATCGGGGG CATCCTGTGG CGTGGTGCCA CGCGGGTGGG GGCGGCCCTT
GGGATCGGGT CGGGTTTCGC GATTTGGGGC TGGCTCCTGC TGCTGCCCAA TGTGGCCGAG
ACTGGCGGGT TGCTCGCCCC GATGCTGTCG GAGGGCGTGT TCGGGCTGAC ATGGCTGCCC
CCGGTCACAC CCCTTGGCTT GCAGGCCACC GATCCGCTGC TGACCGCGAT GGTCCTGTCC
CTGGGGATCA ATACGACGCT GTTTATTCTG GGGTCCCTGT TCAGCTTCCC CTCGCCGCTG
GAGCGCTTGC AAGGGGCGCA ATTCGTCAAC GTCTTCGACC ATTCCCGCGC CCTGAGAGGG
TGGCGCGGAG CCGCGGGCAC GGCGGATGAC CTGTTGATCA TGGCGCAGCG GATCATGGGC
CCGGGCCGCG CGGGGCGGCT GTTTGCGGAG GTGGCCGTGG CCCAGGGCCG CGAGGGGGAA
TTGCCCGAAC CGACCCCGGA TTTTCTGGAG CGGCTGGAGC GGGAATTGGC AGGCTCCGTC
GGCGCGGCCA CAGCCCACGC GATGGTGGCG CAGATCACCG GGGCCGCGTC CGTGTCGGTG
CGCGATCTGC TGGCCGTGGC CGACGAGACG GCGCAGATCA TGGAATATTC CAGCCAGTTG
GAGGCCAAAT CCGAAGAATT GGCCCAGACC GCCCGCCGCC TGCGGGAGGC CAACGCCAAG
CTGACCGAGC TGTCGGTGCA GAAGGACGCG TTTTTGTCCC AGATCTCCCA CGAATTGCGC
ACGCCGATGA CGTCAATCCG CGCGTTTTCC GAGATTTTGA TGCAATCGGA CCCAGTGGAT
GACGCGGCAC GGCTGCGGTT CAGCCGGATC ATGCATGACG AAAGCCTGCG GCTGACGCGG
TTGCTGGATG ATTTGCTGGA CCTGAGCGTG CTGGAGAACG GGCGCGTGAC GCTGAACATG
GGGGCGGCGG TTCTGGCCGA TGTGATGGAC CGCGCGATCT CCGTGGCGGG GATGGGGGCG
GGGGCTGGCC TGACGATCCG GCGCGACCGG GCGGCGGAAA ACATCGCCCT GTGGACTGAT
GCGGACCGCC TGAGCCAGGT CTTCATCAAC CTCATCTCCA ACGCCCAGAA ATATTGCGAC
GCCCAGGCGC CTGAGCTGAC GATATCCGTG GTGCAGACGG GGCAGGGGCT GGCCGTTGAT
TTTGAAGATA ACGGTTCGGG CATTCCGGCC CGGCAGGAGG CTTTGATCTT TGAAAAATTT
GCCCGCCTCG ACACCGCGCG CGGGGCGCCT GGGGCGGGGC TTGGCCTGGC GATCAGCCGC
GAGGTGATGA CGCGGCTGGA TGGGCGGCTC AGTTTCCTGC CCGGCCCGGG CGGCGCGCGG
TTCCGGGTGC AATTGTCGGT GGCATCTTTA CGGGCTGCGT AA
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| Protein sequence | MLSLDGLVII CVLYVLGLFA IAFWAEKSAA KGGAGWLNSP ITYTLSLSIY ATAWTFYGAV
GSAARSGLEF LTIYLGPTLM FVGWFWLLRK VVRIGRAQRI TSVADMISSR YGKSGGLAAL
VTLLAVVGTT PYIALQLQSV TLSFSVFAQP GAFGSANTDS TAVWLAFGLA VFTIIFGTRS
LDLNERHPGL VSAIACEAVV KLAAILAVGV FVVWGVADGP GDMLARIEAS TIAREPVNGA
RWLGLTVLAG AAILCLPRMF QVLVVENSDE RHLAVAGWAF PLYLMLISLF VVPIAVAGMS
LPGTGDNPDL YVLTVPLSLD QDALALLVFL GGFSAATSMV IVAALALSTM VSNHIVVPLW
LWIGPSGDAM GGDMRRVALM ARRVSIAGVL ALGLMYYRQS GGTAALASIG LISFLGVAQV
LPALIGGILW RGATRVGAAL GIGSGFAIWG WLLLLPNVAE TGGLLAPMLS EGVFGLTWLP
PVTPLGLQAT DPLLTAMVLS LGINTTLFIL GSLFSFPSPL ERLQGAQFVN VFDHSRALRG
WRGAAGTADD LLIMAQRIMG PGRAGRLFAE VAVAQGREGE LPEPTPDFLE RLERELAGSV
GAATAHAMVA QITGAASVSV RDLLAVADET AQIMEYSSQL EAKSEELAQT ARRLREANAK
LTELSVQKDA FLSQISHELR TPMTSIRAFS EILMQSDPVD DAARLRFSRI MHDESLRLTR
LLDDLLDLSV LENGRVTLNM GAAVLADVMD RAISVAGMGA GAGLTIRRDR AAENIALWTD
ADRLSQVFIN LISNAQKYCD AQAPELTISV VQTGQGLAVD FEDNGSGIPA RQEALIFEKF
ARLDTARGAP GAGLGLAISR EVMTRLDGRL SFLPGPGGAR FRVQLSVASL RAA
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