| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2678 |
|---|
| Symbol | |
|---|
| ID | 3935142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2688737 |
|---|
| End bp | 2689558 |
|---|
| Gene Length | 822 bp |
|---|
| Protein Length | 273 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637905043 |
|---|
| Product | transglutaminase-like |
|---|
| Protein accession | YP_510620 |
|---|
| Protein GI | 89055169 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.140905 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.95628 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTGA CGATTTCGCA TACAACAACC TACCGGTTCG AGCAGCCCGC CCATTACGGT
CTGCAACAGC TGCGTCTGAC GCCGCTGTCC CTGCCCGGTC TGCAGAACGT TGTGTCGTGG
AACATGGATG TCGAGGGAGG GCAGATAGAG ACGACGTTCC GCGATCAGCA TTGCAACGAG
GTGGTGCTGG TGTCCTTTGA CACAGACGCC CATGAGATCC GCGTGACGTG CAAGGGGCAG
GTGGATGTGG TGGATACCGC CGGCGTCGTG GGCAAACACG CGGTGGGCAA ACGCGGGGCC
TACGCGCCGC TGTGGTATTT CCAACGGACC ACCGCGCGCA CGACGGCGGG CGAGAACGTC
ACCGCGATGA TTGACGGGCT GGCCGCGGAG GTCCCTGACG ATGTGTCGCG CCTGCACACC
CTGTCGGCCC GCATTCTTGA GGCCGTGCCC TACAAAATCG GCACCACCGG CGCAGAGACG
ACGGCGGAGG ATGCCATCGC CGCAGAGGGC GGCGTGTGCC AAGACCACGC CCACATCTTC
ATCGCCGCCG CCCGCGCCAT GGGATATCCG GCGCGCTATG TCTCTGGCTA CTTGATGATG
AACGACCGGG TGCATCAGGA CGCGTCCCAC GCCTGGGCCG AGGCCCATGT GCCGGGGATC
GGGTGGGTCG GTTTCGATGT GTCAAACGGC TATTCGCCCG ATCCACGCTA TGTGCGCGTG
GCCACCGGTC TGGATTACGC GGAAGCGGCC CCCATCGCGG GCCTGCATTA CGGTGCGTCG
GGCGAGGCGA TGTCTGTCGA CATCCAGGTC GCACAGCAGT AG
|
|---|
| Protein sequence | MQLTISHTTT YRFEQPAHYG LQQLRLTPLS LPGLQNVVSW NMDVEGGQIE TTFRDQHCNE
VVLVSFDTDA HEIRVTCKGQ VDVVDTAGVV GKHAVGKRGA YAPLWYFQRT TARTTAGENV
TAMIDGLAAE VPDDVSRLHT LSARILEAVP YKIGTTGAET TAEDAIAAEG GVCQDHAHIF
IAAARAMGYP ARYVSGYLMM NDRVHQDASH AWAEAHVPGI GWVGFDVSNG YSPDPRYVRV
ATGLDYAEAA PIAGLHYGAS GEAMSVDIQV AQQ
|
|---|
| |