Gene Jann_2669 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2669 
Symbol 
ID3935133 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2679938 
End bp2680804 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content62% 
IMG OID637905034 
Productpeptidase C26 
Protein accessionYP_510611 
Protein GI89055160 
COG category[R] General function prediction only 
COG ID[COG2071] Predicted glutamine amidotransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0275908 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.209518 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGGCC CTTTGCGCGG CAAAGTCTCT TTTCCTTGGG GGCTGCGACC GCTACCTATG 
CTGGTGTATC ACGAATTTGG ACGCAGTATG ACCCGCCCCG TCATTGGCAT TATTGGCAAT
CACCACCTGA TCAACGATCA ATATGCAACC CATGCCGGCG GCATCATGAA TTCGGAGGCC
GTGGCCGAGG TATCCGGCGG GTTGCCGCTG ATTGTGCCCT CAAATCCCGC ATTCGTGGAC
CTTGATGATC TGATGGCGAC CTGTGCGGGC TTCGTCTTTA CCGGTGGGCG GCCCAATGTG
CACCCCGAGG AATATGGCGA GGATTATACC GACGCCCACG GCACCATGGA CCGGGACCGC
GACGCGCTGA CCTTGCCGCT GATCCGCGCC TGTGTGGAGC GGGGGCAGCC GATCCTTGGC
CTGTGTCGCG GGTTTCAGGA GGTCAACGTG GCGATGGGCG GATCTCTCTA CCCCGAAATC
CGGGACCTGC CCGGTCGCAT GAACCACCGT ATGCCGCCCG ACGGCACGAT CGAGGAGAAG
TTTGAGCTTC GCCACACCGT CACCTTCACT GAAGGTGGGC CGTTTCATCG GCTGATGGGG
GCGCAACAGG TGCGCACCAA TACGCTTCAC GGTCAGGGCA TCAAACAGGC CGGGGCGCGG
GTGATCATTG ATGGCCATGC AGAAGACGGC ACGCCGGAGG CGATCTACAT CGCCGATGCG
CCCGGGTTCA CGCTGTCTGT TCAATGGCAT CCTGAGTATC GCGCGGCGGA GGATCCGGTG
TCTCGTCCGC TGTTTGCCGC CTTTGGGGAG GCCGCGCGCG CCTGGTCTAT AGGCAAACGC
CCCGTGAAGG CAGGCGAGGT CGCCTGA
 
Protein sequence
MRGPLRGKVS FPWGLRPLPM LVYHEFGRSM TRPVIGIIGN HHLINDQYAT HAGGIMNSEA 
VAEVSGGLPL IVPSNPAFVD LDDLMATCAG FVFTGGRPNV HPEEYGEDYT DAHGTMDRDR
DALTLPLIRA CVERGQPILG LCRGFQEVNV AMGGSLYPEI RDLPGRMNHR MPPDGTIEEK
FELRHTVTFT EGGPFHRLMG AQQVRTNTLH GQGIKQAGAR VIIDGHAEDG TPEAIYIADA
PGFTLSVQWH PEYRAAEDPV SRPLFAAFGE AARAWSIGKR PVKAGEVA