Gene Jann_2667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2667 
Symbol 
ID3935131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2677458 
End bp2679056 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content62% 
IMG OID637905032 
ProductATP-dependent DNA ligase 
Protein accessionYP_510609 
Protein GI89055158 
COG category[L] Replication, recombination and repair 
COG ID[COG1793] ATP-dependent DNA ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.256758 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGCCT TCGCCGCCCT TTTCACGACG CTGGATCAGA CCACCAAGAC CAGCGTGAAG 
ACGGCCGCGC TGGCCGACTA TTTCCGCACG GCGCCCGAGG ATGACCGGAT CTGGACCATC
GCATTGCTTT CGGGCCGACG TCCGCGCCGC ACCATCACCA CCACAAAACT GCGCGAATGG
GCGGCGGAGC GGGCGGGCAT TCCGCTGTGG CTGTTTGAGG CCTGTTATCC GGTCGTGGGT
GACCTGAGCG AGACCATTGC CCTTGTTTTG CCGGAGCCCG AGACCCGGAT CGACAAAAGC
CTGAGCGCCT GGATCGCCAC GCTGCGCGGC CTCGACAATG CGGAGGAGGA TGCGCGCAAG
GCCGCGATTC TGGAGGCCTG GAACGGTCTG CCCCCGATCG AACGGTTTGT TTTCAATAAG
TTGATTACCG GCGGCTGGCG CATGGGGGTG AGTCAAAAGC TGATGACCCG CGCGCTGTCG
AAGGCCACTG ACATCGATGA GGCGGAACTG ACACACCGCC TGATGGGCGA TTGGTCGCCC
GACACGGTCA GTTGGGACGG CCTGATCGAA GCGCCCGATC CAACAACGAA CCTTAGCCGA
CCCTACCCGT TCTATCTGGC TTATCAGCTG GAGGGCGACG CGGAGGACCA GGGAGGCGTC
GGCGATTGGG TGGCGGAGCG GAAATGGGAC GGCATTCGCG GCCAGCTGAT CATGCGCGGA
GGCGAGCGCT ATCTGTGGTC GCGTGGCGAA GACCTGATGA CGGACCGGTT CCCGGAGTTT
GCGCAGCTGC TGGACTACCT GCCCTCGGGG ACGGTTCTTG ACGGCGAGGT TTTGGCGTAT
GACTTTGTTA ACAACACCCC GCTTTCGTTC AATAAGTTGC AACCGCGTAT AGGGCGCAAA
ACTGTGCCCA AGAAGCTTCT GGCCGAGGCC CCGTGCATCC TGATGGCCTA TGATCTGCTG
GAATGGCAGG GCGCGGACAT TCGGCACAGG CCGTTGGCCG AGCGGCGCGC TTTGTTGGAG
GAGGCCACCG ACAATATGCC ACCCGACGCC CCCCTCCGCC TGTCGCCGAG GGTGGAGGCC
GAGAGTTGGG ACGACCTGCG CGCCGCACGC GCCATCAGCC GCGACATAGG GGCAGAGGGG
TTGATGCTGA AGCGTCTTTC GGCACCCTAT CTAGCCGGGC GCAAAAAGGG CGATTGGTGG
AAATGGAAGG TCGATCCACT GACCATCGAC GCGGTGATGA TCTATGCGCA GGCGGGTTCC
GGCCGGCGGG CAACGCTCTA CACCGATTTC ACATTCGCGG TCTGGAACGG CCCCGATCTG
GTGCCCTTCA CCAAGGCCTA TTCCGGCCTC ACCGACAAGG AATTCCGCGA GATCACGGCC
TGGGTTCGCA AGAACACGAC GGACCGGTTC GGCCCCGTCC GCGCGGTCAC GCCGCACCAT
GTGTTTGAGA TTGCGTTCGA AGGCATTCAA CCCTCACCGC GCCACAAATC CGGCGTTGCC
CTGCGCTTTC CCCGCATGTT GCGCTGGCGC AAAGACAAGC CGTTGGAAGA GGCCAATACA
TTGGACGACC TCAACCAGAT GCTGGAACAA TACGGCTAA
 
Protein sequence
MKAFAALFTT LDQTTKTSVK TAALADYFRT APEDDRIWTI ALLSGRRPRR TITTTKLREW 
AAERAGIPLW LFEACYPVVG DLSETIALVL PEPETRIDKS LSAWIATLRG LDNAEEDARK
AAILEAWNGL PPIERFVFNK LITGGWRMGV SQKLMTRALS KATDIDEAEL THRLMGDWSP
DTVSWDGLIE APDPTTNLSR PYPFYLAYQL EGDAEDQGGV GDWVAERKWD GIRGQLIMRG
GERYLWSRGE DLMTDRFPEF AQLLDYLPSG TVLDGEVLAY DFVNNTPLSF NKLQPRIGRK
TVPKKLLAEA PCILMAYDLL EWQGADIRHR PLAERRALLE EATDNMPPDA PLRLSPRVEA
ESWDDLRAAR AISRDIGAEG LMLKRLSAPY LAGRKKGDWW KWKVDPLTID AVMIYAQAGS
GRRATLYTDF TFAVWNGPDL VPFTKAYSGL TDKEFREITA WVRKNTTDRF GPVRAVTPHH
VFEIAFEGIQ PSPRHKSGVA LRFPRMLRWR KDKPLEEANT LDDLNQMLEQ YG