| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2665 |
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| Symbol | |
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| ID | 3935129 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2675576 |
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| End bp | 2676583 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637905030 |
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| Product | putative mRNA 3-end processing factor |
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| Protein accession | YP_510607 |
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| Protein GI | 89055156 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.14848 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTTCTGG AATTCACCGA ACGCGGCATC TATTGCCCCG CAGCTGACGC CTATATTGAC
CCTTGGCGCC CGGTGCCTCG GGCCTTGATC ACACATGGTC ATTCTGATCA CGCGCGACCT
GGCCACGGGG CTTATCTGGC GACCGAGGGC TCCGCGCCCG TCATGCGTCA CCGCCTGGGC
GATATCCAGA TGGAGACGAC CGCTTACGGC GTCACCCACC AGATCGGCGA TGCCCGGATC
AGCTTTCACC CGGCAGGCCA CGTGCCCGGC TCCGCGCAGA TCCGCGTCGA AGTGGGCGGG
GAGGTCTGGG TCGCTTCCGG TGACTACAAG ACCATCAACG ATGGCCTGTC TGAGCCGTTT
GAGCCGGTGC GCTGCGACAC GTTTATCACC GAATCCACCT TCGGCCTGCC GATCTATGAT
TGGCCCGCGC AGCACGCCCT CGCCCGCGAT CTCAACGACT GGTGGGCGAC ATGCGTGGCG
GATGGAAAAC GCGCCGTCCT CGGCGTCTAT GCCCTTGGAA AAGCCCAACG GATCATGCGC
CTGCTGGATC CGGCCATTGG CCCGATCCTG ACCCACGGCG CGGTGGAGGC AACCAACCGC
GTTTTGCGCG GACAAGGCAT CAGCCTGCCC GATACGGTGC CCGTCGTGGA CGGCGTTGAT
GGCAAATCTC ACCCCAACGC CATTGTGCTC GCCCCGCCCT CCGCCCTCGG AACCACATGG
ATGAAGCGTT TTGGCGCGGT CTCCACCGGT TTCGCCTCGG GCTGGATGCG CCTGCGCGGT
GTGCGCCGCA GGCGCGCGGC GGATCGGGGC TTCGTGGTCA GCGACCATGC CGATTGGAAG
GGTTTGAACG CAGCCATCGC GGCGACCGAG GCCGACCGGG TCTTCGTAAC CCACGGCTAC
ACCGCGCAAT TTTCCCAATG GCTTGGTGAG CAAGGCTATC AGGCGGGTAT CGTCGAGACG
GAATTTGGCG GAGAGGACCT TGATGAGGCC GAGGAGACGG CGGCATGA
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| Protein sequence | MVLEFTERGI YCPAADAYID PWRPVPRALI THGHSDHARP GHGAYLATEG SAPVMRHRLG
DIQMETTAYG VTHQIGDARI SFHPAGHVPG SAQIRVEVGG EVWVASGDYK TINDGLSEPF
EPVRCDTFIT ESTFGLPIYD WPAQHALARD LNDWWATCVA DGKRAVLGVY ALGKAQRIMR
LLDPAIGPIL THGAVEATNR VLRGQGISLP DTVPVVDGVD GKSHPNAIVL APPSALGTTW
MKRFGAVSTG FASGWMRLRG VRRRRAADRG FVVSDHADWK GLNAAIAATE ADRVFVTHGY
TAQFSQWLGE QGYQAGIVET EFGGEDLDEA EETAA
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