| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2649 |
|---|
| Symbol | |
|---|
| ID | 3935113 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2663292 |
|---|
| End bp | 2664035 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637905014 |
|---|
| Product | heme exporter protein CcmC |
|---|
| Protein accession | YP_510591 |
|---|
| Protein GI | 89055140 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0755] ABC-type transport system involved in cytochrome c biogenesis, permease component |
|---|
| TIGRFAM ID | [TIGR01191] heme exporter protein CcmC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.00358111 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0120286 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCCCGC CCATGTCCTC GATCTGGGAA TACGCGAACC CGCGACGGTT CATGGCCACG
TCCGGCGCGA TCCTTCCCTG GGTCTCGGCG CTTGCCGCAT TGGTCCTGGG TGTTGGTCTG
ATCTGGGGAT TTTTCTTCAC GCCCGATGAC TTCCGCATGG GTTCCACCGT GAAGATCATC
TACATCCATG TGCCCGCCGC GATCATGGCG ACGTCCGCTT GGTTCATGAT GCTGGTGACA
TCGCTGATCT GGGTGATCCG CCGCCATCAC GTCAGCGCTC TGGCAGCAAA GGCCGCCGCG
CCCATTGGTC TGGTCTTCAC TCTGATCGGG CTGTTTACCG GCGCTGTCTG GGGGCAACCG
ATGTGGGGCA CCTGGTGGGC CTGGGATCCG CGCCTGACCT CATTCCTGAT CCTGTTCCTC
TTTTATCTGG GCTACATCGC GCTGTGGGAG GCAGTTGAAA ACCCCGATGC GGCAGCTGAT
CTGACCTCGG TCCTGTGCCT CGTGGGGACG GTCTTTGCCG TCATCTCGCG CTACGCGATC
CTGTTCTGGA ACCAGGGCCT GCATCAGGGC GCGTCGCTGA GCATGGACGC GGAGGAGAAC
GTGGCCGATG TCTTCGCCTA TCCGCTGTGG ACCTGTATCG GCGGGTTTTT CCTGCTGTTC
GTGGCGCTGG TGCTGTACCG GACCAGAACC GAAATCCGCG CGCGCCGCCT CAAGGCGTTG
ATTGCGCAGG AGCAAATGGC CTGA
|
|---|
| Protein sequence | MFPPMSSIWE YANPRRFMAT SGAILPWVSA LAALVLGVGL IWGFFFTPDD FRMGSTVKII
YIHVPAAIMA TSAWFMMLVT SLIWVIRRHH VSALAAKAAA PIGLVFTLIG LFTGAVWGQP
MWGTWWAWDP RLTSFLILFL FYLGYIALWE AVENPDAAAD LTSVLCLVGT VFAVISRYAI
LFWNQGLHQG ASLSMDAEEN VADVFAYPLW TCIGGFFLLF VALVLYRTRT EIRARRLKAL
IAQEQMA
|
|---|
| |