Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2631 |
Symbol | |
ID | 3935094 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2647133 |
End bp | 2647726 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637904995 |
Product | TetR family transcriptional regulator |
Protein accession | YP_510573 |
Protein GI | 89055122 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.0870793 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCCGCC CCCGTTCCTT CCAAGAAGAC GATGTGATTG ACCGCGCGAT GCGGGCGTTT TGGCTGAATG GTTATGATGC GACCGCCATC GGCGACCTCG AACAAGCCAC CGGCATCAAA CGGATCAGCA TCTACAACGT ATGGGGAGAT AAAGAAGGGC TCTTCCTTGC CGCCTTGGAT CGCTATCATG GCAAAGCCGT TGAGATTTAC GACGAGACAG TCGCAGCGGG CGGGCTTGAT GAAATCGCGG GTCTCTTTGA CATGATGTCG GCCCCGGCTC CTCGCGACGC ACCGGCGCAT GCGGGATGCC TGATGGTAAA CACCATCCTC GATGTCAGAC GCGTCTCGGA GCCGATCCGG CAACGTGTTC TGGACTACCG CGCCATGTTA AAAAGCGCGT TCCGCTCCGC ACTGGTAACC GCGCGTGAGC ATGGCGATAT GACGTGCGAT GATGACACGC TGGACCGACG CGCAGATTTT CTGGTTGGGA TCCTATGGGG CGCGCTTGCG ACAATCCGCG TCAATGCCGA TACCACCGCG GCCCGGCCTA TTGCCTTGGA AACGGCTAAA ACAATCGCGG CGTGGCGCAC GTAG
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Protein sequence | MARPRSFQED DVIDRAMRAF WLNGYDATAI GDLEQATGIK RISIYNVWGD KEGLFLAALD RYHGKAVEIY DETVAAGGLD EIAGLFDMMS APAPRDAPAH AGCLMVNTIL DVRRVSEPIR QRVLDYRAML KSAFRSALVT AREHGDMTCD DDTLDRRADF LVGILWGALA TIRVNADTTA ARPIALETAK TIAAWRT
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