| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2619 |
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| Symbol | |
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| ID | 3935082 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2638607 |
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| End bp | 2639191 |
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| Gene Length | 585 bp |
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| Protein Length | 194 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637904983 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_510561 |
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| Protein GI | 89055110 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.362845 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.246457 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCACGTC AAATCGCATA TGATCCAAAT ACTCTGCGTG AAAACCTTCT GTCGGTTTTC
TGGCAGCAGG GCTATGCGGA AACGTCGCTG AGTGATCTTG AGGCAGCGAC CGGGCTGAAC
CGCCGCCAGC TCTACAATGG CCCGGGCGAC AAGTTGGCGA TGTTCGTTCA GGCCATGGAT
GATTTCGCGG AGCGTGCCGG TCGGGAGTTT CTCGGGCCGT TGGAACAGGA CGGAGCCGGG
ATTGCCGACA TCGTCCATCT TCTCTCAACC TTCGTGGCGT TGGCCGCTGC AAAGGACGGT
CCGACCGGAT GCCTTGTCTG TAGCGTGTCA CAAGAGGAGG TCTCGCAGGA ACAGGCCGTG
AAACGGCGTG CCGACGCTTA TTTCGAGCGT ATCAAAGCCG CTTACGAAAA TGCGCTGCGC
CGGTCAGTCG CGCGCGGCGA ATGTGATCTG ACGGAACGTG CGATCAGCGA CCATGCCTCT
GGGTTGTATG CCGCCCATGT CGCCCTTTGC ATCCTTGGCC GGGCCGGGCG TCCGAACAAG
GAACTAAACG CGATCGCAGA AAACGCGCTG AAGGACCTGG TCTAA
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| Protein sequence | MARQIAYDPN TLRENLLSVF WQQGYAETSL SDLEAATGLN RRQLYNGPGD KLAMFVQAMD
DFAERAGREF LGPLEQDGAG IADIVHLLST FVALAAAKDG PTGCLVCSVS QEEVSQEQAV
KRRADAYFER IKAAYENALR RSVARGECDL TERAISDHAS GLYAAHVALC ILGRAGRPNK
ELNAIAENAL KDLV
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