| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2610 |
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| Symbol | |
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| ID | 3935073 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2625788 |
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| End bp | 2626666 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904974 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_510552 |
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| Protein GI | 89055101 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.309189 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.877697 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTGCGG CGGGGCGCGA TTTGCGTATT TCGCCAGCTG TCACGTCGTC TCGGATTTCG
CAGCTGGAGG AGCATCTGAG CGTGCGGCTG TTCCAGCGCA CCACGCGCAG TCTGACGCCG
ACGGAACATG GCAAGGCCTT CTATTCCGGC GCGAAGGAAA TCCTTGAATC GGTTGAGAAT
GCCGAAGCGC AAGTCATTGA TATCACGGAG AACCCAAAGG GGTCACTCTA TGTGGCTGCC
CCTTTGGGTG TGGGACGTCG CCTGATTGCC CCGGAGGTGC CGGGGTTCCT TGACCTTTAT
CCGGAGGTTC GCGTGCGCCT GCGTCTGACC GACCGGAAAG TGGATCTGAC GACCGAAGGC
CTCGACCTCG CGTTTTTTCT GGGGGAGCCT GAGGACAGCA CGCTTCGTAT CCGCAAGATC
GCGGACGTGG AACGGGTTCT GTGCGCCGCG CCAGACTACG TTGCGGCCCG CGGTATGCCT
GCGGGCGGTG CGGAGCTGAC GTCTGGGGCG CATGAATGCC TCAACCTGCG ATTTCCCGGC
GCGACGGAAT TCCAGTGGCA CCTGAAGACA CCGGACGGAC CCAAGCGCTT CCGCATCCAG
GGGCGCTACG AATCCGATGA TGGTGATGTG CTGAATGACT GGGCGTTGGC GGGTCAAGGC
ATTGTGATGA AACCGATTTT TGAGGTGGCC GAGCATCTGA AGGCGGGCCG GTTGGTGGCG
GTGGCGCAGG AAACGCCGCC GATGCCGATC CAGATGGCGT GCCTGTTCAC CCATCGCCGG
ATGCAGGATC CGAAGACGCG GCTCTTCATG GAATTCGTGA TCAACCGCAT TGGCGATCTG
GTGCGGCAGG CCGAAAAGCT GGGTCAGCTG CCGCGATAG
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| Protein sequence | MSAAGRDLRI SPAVTSSRIS QLEEHLSVRL FQRTTRSLTP TEHGKAFYSG AKEILESVEN
AEAQVIDITE NPKGSLYVAA PLGVGRRLIA PEVPGFLDLY PEVRVRLRLT DRKVDLTTEG
LDLAFFLGEP EDSTLRIRKI ADVERVLCAA PDYVAARGMP AGGAELTSGA HECLNLRFPG
ATEFQWHLKT PDGPKRFRIQ GRYESDDGDV LNDWALAGQG IVMKPIFEVA EHLKAGRLVA
VAQETPPMPI QMACLFTHRR MQDPKTRLFM EFVINRIGDL VRQAEKLGQL PR
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