| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2608 |
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| Symbol | |
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| ID | 3935071 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2623884 |
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| End bp | 2625296 |
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| Gene Length | 1413 bp |
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| Protein Length | 470 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637904972 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_510550 |
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| Protein GI | 89055099 |
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| COG category | [G] Carbohydrate transport and metabolism
[S] Function unknown |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase
[COG3195] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03164] OHCU decarboxylase
[TIGR03212] putative urate catabolism protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.234618 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAACCGCT ACCCACGCGA TATGTCCGGA TACGGGGCCA ACCCACCCGC CGCCAATTGG
CCGGGAGGGG CAAAGATCGC TGTCAACTTT GTGCTTAATT ATGAGGAGGG TGGCGAGAAC
AACATCCTCC ACGGCGATGG GGCGTCCGAG GCGTTTTTGT CGGAGATCAC CGGGGCCGCC
CCCTGGACGG GGCAGCGCCA TTGGAACATG GAATCGCTAT ACGAATATGG CGCGCGCGCC
GGGTTCTGGC GCGTCCATCG CATCCTGAAC GACGTGCCTG TGACGGTCTA CGGTGTGGCG
ACAGCGCTGG CCCGCGCGCC GGAACAGGTG GCCGCAATGA CGGCTGCGGG TTGGGAAATT
GCCAGCCACG GCCTCAAGTG GGTGGAGCAT AAGGACATGC CCGCGGAGGA GGAACGCGCC
CAGATCGTTG AAGCGATCCG CCTGCACACC GAAGTGACGG GCCAGCCGCC GCGCGGTTGG
TACACGGGGC GCTGCTCGAT GAACACCGTT GATCTGGCCG CGGAAGAGGG CGATCTGGCC
TATATCTCAG ACGATTACGC CGATGATCTC CCCTATTGGG TGACGGCGGG CGGCCAGGAT
CAGCTGATCT TGCCCTACAC GATGGATTGC AACGACATGC GCTTTGCGAT CCAGGCGGGC
TTCACCACAG GTGCTGATTT TGAGGCGATG CTGCGCGATG CGTTCGACAC GCTTTATGCA
GAAGGTCAGG CAGGTGCGCC CAAGATGATG ACCATCGGGC TGCATTGTCG CATCATCGGG
CGCCCAAGTC GGGCGGCCGC GTTGAAACGT GTGCTGGAGT ATATGCAAGG TCACGATGAT
GTCTGGTTCG CGACCCGCGA GGACATTGCG GACCATTGGG CGGCAGAGCA TCCCCCTCGC
CACCGCGCGC GCCCTTCGCA GATGGACCGG GACGCCTTCG TGGAGGCATT TGGCGGCATC
TTCGAGCATT CCCCATGGAT CGCGGAGGGG GCCCACGCGC TGGAACTTGG ACCCATGCAT
GACAGTGCGG TTGGCGTCCA CTCGGCCCTT GCACGGGTGT TCCGCTCGGC GTCCGAGGGG
CAACGTTTGG ATGTCCTGAA GGCGCATCCC GATCTGGCGG GCAAGCTGGC GGCTGCGGGC
AAACTGACAG CAGAATCGAC CGCCGAGCAA GCGGGCGCGG GGCTGGATCT GCTGACCGAT
GAGGAGCGCG CAACCTTCCA AACCCTCAAC GCGCAATACG TGGATCGCCA CGGCTTTCCT
TTCATCATCG CCGTCAAAGA CAACACCAAA GCGTCTATTC TTGAGGCATT CCACACCCGC
ATCGCCAACC CACGCGACAT CGAATTCACC GAGGCCTGCA AACAGGTCGA ACGGATTGCC
GAGTTGCGGC TGTTGGAGAA ACTGGGCCAA TGA
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| Protein sequence | MNRYPRDMSG YGANPPAANW PGGAKIAVNF VLNYEEGGEN NILHGDGASE AFLSEITGAA
PWTGQRHWNM ESLYEYGARA GFWRVHRILN DVPVTVYGVA TALARAPEQV AAMTAAGWEI
ASHGLKWVEH KDMPAEEERA QIVEAIRLHT EVTGQPPRGW YTGRCSMNTV DLAAEEGDLA
YISDDYADDL PYWVTAGGQD QLILPYTMDC NDMRFAIQAG FTTGADFEAM LRDAFDTLYA
EGQAGAPKMM TIGLHCRIIG RPSRAAALKR VLEYMQGHDD VWFATREDIA DHWAAEHPPR
HRARPSQMDR DAFVEAFGGI FEHSPWIAEG AHALELGPMH DSAVGVHSAL ARVFRSASEG
QRLDVLKAHP DLAGKLAAAG KLTAESTAEQ AGAGLDLLTD EERATFQTLN AQYVDRHGFP
FIIAVKDNTK ASILEAFHTR IANPRDIEFT EACKQVERIA ELRLLEKLGQ
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