| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2605 |
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| Symbol | |
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| ID | 3935068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2620872 |
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| End bp | 2621837 |
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| Gene Length | 966 bp |
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| Protein Length | 321 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904969 |
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| Product | ornithine cyclodeaminase |
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| Protein accession | YP_510547 |
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| Protein GI | 89055096 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00162792 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATATCG TGCCCGAGCG CGCAATTGCG GACCTGATGA CGCGGGAGGC CGCGTTCGAT
GCGGTTGAAA AGGTATTTGC CGCCATGGCC GCAGGCGACG CCTATAACTT TCCCGTCGTG
CGCGAGGCCA TCGGCCACGA AGACGCGCTT TACGGCTTCA AGGGCGGGTT CGATCAGGCT
GGTCTGACGC TGGGGCTAAA GGCGGGGGGC TACTGGCCCA ACAACCTTGA GAAGCGTGAC
TTGATCAACC ACCAGTCGAC GGTGTTTCTG TTTGACCCCG ATACCGGCAA AGCCAAAGCC
ATGGTTGGCG GCAACCTGTT GACCGCCCTG CGCACGGCGG CGGCGTCCAG CGTCTCTATC
AAGCACCTGG CGCGCGACGA CGCGAAAGTT ATCGGCATGA TTGGCGCGGG CCACCAAGCC
ACGTTCCAGT TGCGCGCGGC ACTGGAGCAG CGGACCTTCG AAAAGGTCAT TGGCTGGAAC
TACCACCCCG ATATGCTGCC CAACATCGAG AAGGTCGCGA CTGAGGCGGG CGTGCCGTTT
GAGGCGGTCG ACCTGCCGGG CATGGCTGAG GCGGATGTGA TCATCTCCAT CACGTCGGCC
TTCGCGCCTT CGCTGATGGC GGACCATGTC GCGCCGGGCA CACACATCGC CTGCATGGGC
ACCGACACCA AGGGCAAGCA GGAGGTCGAG GCCGCGCTTC TGGCGCGCGC GACGGTGTTC
ACCGATGAGG TGGCGCAGTC CGTCTCCATC GGCGAAGCGC AGCATGCCGT CGCCGATGGC
TTGATCGCGG AGGGCGACGT CCATCAACTC GGCGCAGTGA TCAATGGCAC CCATGCGGGC
CGCGCCTCCG CCGACGAGAT CACGCTGTTT GACGGGACGG GCGTTGGCTT GCAGGACCTG
GCCGTTGCGG CATCAGTCGT CGATCTGGCG ATTAAAAAAG GCGTGGCGAT TGAGGTCGAC
TTCTAG
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| Protein sequence | MYIVPERAIA DLMTREAAFD AVEKVFAAMA AGDAYNFPVV REAIGHEDAL YGFKGGFDQA
GLTLGLKAGG YWPNNLEKRD LINHQSTVFL FDPDTGKAKA MVGGNLLTAL RTAAASSVSI
KHLARDDAKV IGMIGAGHQA TFQLRAALEQ RTFEKVIGWN YHPDMLPNIE KVATEAGVPF
EAVDLPGMAE ADVIISITSA FAPSLMADHV APGTHIACMG TDTKGKQEVE AALLARATVF
TDEVAQSVSI GEAQHAVADG LIAEGDVHQL GAVINGTHAG RASADEITLF DGTGVGLQDL
AVAASVVDLA IKKGVAIEVD F
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