Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2604 |
Symbol | |
ID | 3935067 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | + |
Start bp | 2619584 |
End bp | 2620747 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637904968 |
Product | D-3-hydroxyaspartate aldolase |
Protein accession | YP_510546 |
Protein GI | 89055095 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3616] Predicted amino acid aldolase or racemase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00289104 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACAAGC AAGTGAATTT CGATGAGCTG GAAGTTGGTT ATGACGTCCC CGCGCTGCCC GGCATGGATG AGGCTGATAT CCAGACTCCC TGCCTGGTGC TGGATCTGGA CGCGCTGGAG CGGAACATCA AGAAGATGGG TGATTACGCA CGCGAACACG GGATGCGCCA CAGGGTTCAC GGCAAGATGC ACAAGTCCGT TGATGTGGCC AAGTTGCAGG AAGAGCTTGG CGGGGCCTGC GGTGTGTGCT GCCAAAAGGT GTCCGAGGCC GAGGTCTTCG CGCGTGGCGG GATCAAGGAT GTCATGGTCT CCAACCAGGT GACGGACCCG CAGAAGATCG ACCGCTTGGC GCGCATGCCG AAGTTTGGCG CACGTGTGCT GTGTTGTGTG GACGATCCGG CCAACGTGGC GGATCTGTCG GCGGCAGCCG TCAAGCACGG CACCCAGATC GAGGCGCTGG TGGAGATCGA TTGCGGCGCG GGCCGCTGCG GCGTGACCAC GACGCAGGAG GTCGTGAACA TCGCGAAGAT GATCGACGCC GCCGAGGGCC TGAAGTTTGC GGGCATCCAG GCCTACCAAG GCGCGATGCA GCACCTCGAC AGCTATGACG AACGCGCGAG CAAGACCCAG GTCGCCATCG ACATGGTCGA GGACGCGATT GCAGGCCTGA AGGCCAATGG GTTGGAATGT GATATCGTCG GTGGCGGCGG CACGGGCAGC TACTACTTTG AAAGCAATTC GGGCGCGTTC AATGAGCTTC AGTGCGGGTC CTATGCGTTC ATGGACGCGG ATTATGGCCG TATCCTCGAC AAGGACGGCA AGCGCATCGA CGACGGCGAA TGGGAGAATG CGCTATTCAT CCTGACATCC GTGATGAGCC ATGCGAAGGC CGACAAAGCC ATCGTAGACG CAGGCCTGAA AGCACAATCC GTCGACTCTG GGCTGCCAAC GATCTATGGA CGCGATGACG TGGAATACGT CAAATGCTCC GATGAGCATG GCGTGGTGAT GGATCCGGAC GGTGTGCTGA ATGTGAACGA CAAGCTGCGC CTGGTGCCCG GCCATTGTGA TCCCACCTGC AACGTCCACG ATTGGTATGT CGGCGTGCGC GGCGGCAAGG TCGAGACGCT GTGGCCCGTG TCGGCGCGTG GCAAGGCGTA TTGA
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Protein sequence | MNKQVNFDEL EVGYDVPALP GMDEADIQTP CLVLDLDALE RNIKKMGDYA REHGMRHRVH GKMHKSVDVA KLQEELGGAC GVCCQKVSEA EVFARGGIKD VMVSNQVTDP QKIDRLARMP KFGARVLCCV DDPANVADLS AAAVKHGTQI EALVEIDCGA GRCGVTTTQE VVNIAKMIDA AEGLKFAGIQ AYQGAMQHLD SYDERASKTQ VAIDMVEDAI AGLKANGLEC DIVGGGGTGS YYFESNSGAF NELQCGSYAF MDADYGRILD KDGKRIDDGE WENALFILTS VMSHAKADKA IVDAGLKAQS VDSGLPTIYG RDDVEYVKCS DEHGVVMDPD GVLNVNDKLR LVPGHCDPTC NVHDWYVGVR GGKVETLWPV SARGKAY
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