Gene Jann_2604 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2604 
Symbol 
ID3935067 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2619584 
End bp2620747 
Gene Length1164 bp 
Protein Length387 aa 
Translation table11 
GC content61% 
IMG OID637904968 
ProductD-3-hydroxyaspartate aldolase 
Protein accessionYP_510546 
Protein GI89055095 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00289104 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAGC AAGTGAATTT CGATGAGCTG GAAGTTGGTT ATGACGTCCC CGCGCTGCCC 
GGCATGGATG AGGCTGATAT CCAGACTCCC TGCCTGGTGC TGGATCTGGA CGCGCTGGAG
CGGAACATCA AGAAGATGGG TGATTACGCA CGCGAACACG GGATGCGCCA CAGGGTTCAC
GGCAAGATGC ACAAGTCCGT TGATGTGGCC AAGTTGCAGG AAGAGCTTGG CGGGGCCTGC
GGTGTGTGCT GCCAAAAGGT GTCCGAGGCC GAGGTCTTCG CGCGTGGCGG GATCAAGGAT
GTCATGGTCT CCAACCAGGT GACGGACCCG CAGAAGATCG ACCGCTTGGC GCGCATGCCG
AAGTTTGGCG CACGTGTGCT GTGTTGTGTG GACGATCCGG CCAACGTGGC GGATCTGTCG
GCGGCAGCCG TCAAGCACGG CACCCAGATC GAGGCGCTGG TGGAGATCGA TTGCGGCGCG
GGCCGCTGCG GCGTGACCAC GACGCAGGAG GTCGTGAACA TCGCGAAGAT GATCGACGCC
GCCGAGGGCC TGAAGTTTGC GGGCATCCAG GCCTACCAAG GCGCGATGCA GCACCTCGAC
AGCTATGACG AACGCGCGAG CAAGACCCAG GTCGCCATCG ACATGGTCGA GGACGCGATT
GCAGGCCTGA AGGCCAATGG GTTGGAATGT GATATCGTCG GTGGCGGCGG CACGGGCAGC
TACTACTTTG AAAGCAATTC GGGCGCGTTC AATGAGCTTC AGTGCGGGTC CTATGCGTTC
ATGGACGCGG ATTATGGCCG TATCCTCGAC AAGGACGGCA AGCGCATCGA CGACGGCGAA
TGGGAGAATG CGCTATTCAT CCTGACATCC GTGATGAGCC ATGCGAAGGC CGACAAAGCC
ATCGTAGACG CAGGCCTGAA AGCACAATCC GTCGACTCTG GGCTGCCAAC GATCTATGGA
CGCGATGACG TGGAATACGT CAAATGCTCC GATGAGCATG GCGTGGTGAT GGATCCGGAC
GGTGTGCTGA ATGTGAACGA CAAGCTGCGC CTGGTGCCCG GCCATTGTGA TCCCACCTGC
AACGTCCACG ATTGGTATGT CGGCGTGCGC GGCGGCAAGG TCGAGACGCT GTGGCCCGTG
TCGGCGCGTG GCAAGGCGTA TTGA
 
Protein sequence
MNKQVNFDEL EVGYDVPALP GMDEADIQTP CLVLDLDALE RNIKKMGDYA REHGMRHRVH 
GKMHKSVDVA KLQEELGGAC GVCCQKVSEA EVFARGGIKD VMVSNQVTDP QKIDRLARMP
KFGARVLCCV DDPANVADLS AAAVKHGTQI EALVEIDCGA GRCGVTTTQE VVNIAKMIDA
AEGLKFAGIQ AYQGAMQHLD SYDERASKTQ VAIDMVEDAI AGLKANGLEC DIVGGGGTGS
YYFESNSGAF NELQCGSYAF MDADYGRILD KDGKRIDDGE WENALFILTS VMSHAKADKA
IVDAGLKAQS VDSGLPTIYG RDDVEYVKCS DEHGVVMDPD GVLNVNDKLR LVPGHCDPTC
NVHDWYVGVR GGKVETLWPV SARGKAY