| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2592 |
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| Symbol | |
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| ID | 3935055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2603614 |
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| End bp | 2605716 |
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| Gene Length | 2103 bp |
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| Protein Length | 700 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904956 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_510534 |
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| Protein GI | 89055083 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only
[S] Function unknown |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
[COG3347] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR02632] rhamnulose-1-phosphate aldolase/alcohol dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.952395 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGGAAA CCACTGAAAA CGCACGCCTG AAGACCCTTT GGGACGCGGG CAAAGCGGCC
GCGATGTCCG AGTCGAAAAG GCTGCTCTAC CGCTCCAACC TTCTGGGGTC CGACAAGCGG
ATTACCAACT ACGGCGGCGG CAACACGTCC GCCAAGGTGA TGGAACAGGA TCCGTTGACC
GGCGATATGG TCGAGGTCCT GTGGGTCAAG GGATCGGGTG GCGACGTGGG CTCCATCAAG
ATGGACGGCT TCGCGACGCT CTACATGGAT AAGCTGCGCG CCTTGAAGGG GATCTATCGC
GGGGTGGCGT TCGAGGATGA GATGGTTGGC CTGCTGCCCC ACTGCACCTT CAACCTGAAC
ACGCGCGCCG CCTCCATCGA CACGCCGCTC CATGCCTATG TGCCGAAGAA ACACGTCGAC
CACATGCACC CCGACGCGAT CATCGCCATT GCGGCGGCGG CGGACAGCAA GGCCCTGACC
GCAGAGATTT TTGGCGACGA CATCGGCTGG CTGCCCTGGA AGCGGCCGGG CTATGAGCTG
GGGCTGTGGC TGGAGGATTT CTGCCTGAAG AACCCGGACG CCAAGGGGGT CGTTCTGGAA
AGCCACGGGC TGTTCACCTG GGATGATGAT GCGGAGGCCT GCTACGCCCT GACCGTCGAT
GTCATCCAAA AGGCGATGGA TTGGTTCGAG GCGAAAACCC GCGATGTGCC TGCGTTTGGA
GGCGCGGTTC ACACGTCTTT GCCGTCGACA GACCGCCGGG CCGTAGCTGC CCGTCTGATG
CCTGCAATCC GGGGCATGGT TTCGGGCGCG CAGCACATGG TCGGACATTT TGAGGACAGC
GATACGGTCC TGGAGTTTGT GAACGCCCGC GATATGGAGG CCTTGGCCGC CCTCGGCACC
TCCTGTCCGG ATCATTTCCT GCGCACGAAA ATTCGCCCGC TTGTGGTGGG CTTCGATCCG
GCCAAGCCGG ACGTGGACGC GGTTCTGGAC GGATTGCCCG CGCAAGTCGC CTCGTACCGC
GATGAGTATG CCGCCTACTA CGAGCGCTGC AAACATGACG ACAGTCCCGC CCTGCGTGAT
CCCAATGCGG TCGTCTATCT GATCCCCGGC GTCGGCATGG TGACCTTCGC CAAAGACAAG
GCCACGGCGC GGATCTCGGC CGAGTTCTAC GTCAACGCCA TCAACGTGAT GCGCGGCGCG
AGCGCCGTCA GCACCTACTG CGGCCTGCCG GAGCAGGAGG CCTTCGACAT CGAATATTGG
CTGTTGGAGG AGGCCAAGCT GCAACGGATG CCGAAGCCGA AATCGCTGGC GGGGCGTGTC
GCACTGGTCA CCGGTGGGGC GGGGGGCATC GGGTCGGCCA CCGCCGCGCG CTATCTGGCG
GAAGGGGCCT GCGTGGTCCT TGCGGACATT GACGAGGGCG CGCTTGAGGC CACGGCCGCG
GCCCTCTCAG ACCGCTTCTC CGACGATGTC GTCCGCGCGG TTGTCATGAA CGTCACCAGC
GAAGATGCCG TGGCGCGCGC GTTCGCGGAC GCGTCCGTCG CCTATGGCGG GATCGACATC
CTGGTGTCCA ACGCAGGCAT CGCGTCGTCC GCTCCGGTGG AAGAGACATC GTTGGCACTG
TGGCAGAAGA ACATGGACAT CCTGTCGACG GGATATTTTC TGGTCAGCCG GGCGGCGTTC
AAGATACTGC GCGCTCAGGA CATCGGGGGC TCTGTCGTGT TCATCGGCTC CAAAAATGGC
CTGGCTGCCA GTCCGAACGC ATCGGCCTAT TGCACCGCCA AGGCCAGTGA GTTGCATCTG
GCGCGTTGTC TGGCGCTGGA AGGGGCGGGG GCCGGGATAC GGGTCAACGT CGTGAACCCC
GATGCAGTCC TGCAAGGGTC CAAGATCTGG CAGGGCGAAT GGCTGGATCA GCGCGCGTCA
ACCTACGGGA CCGACAAGGC GGGGTTAGAA GAGATGTACC GTGACCGTTC CATGTTGAAG
CGTTCCGTCC TGCCCGGAGA CATCGCTGAG GCCGCGTATT TCTTTGCCGC TGACCTGTCT
GCCAAATCCA CCGGCAACAT CATCAACGTG GATGCGGGCA ACGCGCAGGC GTTCACAAGA
TGA
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| Protein sequence | MLETTENARL KTLWDAGKAA AMSESKRLLY RSNLLGSDKR ITNYGGGNTS AKVMEQDPLT
GDMVEVLWVK GSGGDVGSIK MDGFATLYMD KLRALKGIYR GVAFEDEMVG LLPHCTFNLN
TRAASIDTPL HAYVPKKHVD HMHPDAIIAI AAAADSKALT AEIFGDDIGW LPWKRPGYEL
GLWLEDFCLK NPDAKGVVLE SHGLFTWDDD AEACYALTVD VIQKAMDWFE AKTRDVPAFG
GAVHTSLPST DRRAVAARLM PAIRGMVSGA QHMVGHFEDS DTVLEFVNAR DMEALAALGT
SCPDHFLRTK IRPLVVGFDP AKPDVDAVLD GLPAQVASYR DEYAAYYERC KHDDSPALRD
PNAVVYLIPG VGMVTFAKDK ATARISAEFY VNAINVMRGA SAVSTYCGLP EQEAFDIEYW
LLEEAKLQRM PKPKSLAGRV ALVTGGAGGI GSATAARYLA EGACVVLADI DEGALEATAA
ALSDRFSDDV VRAVVMNVTS EDAVARAFAD ASVAYGGIDI LVSNAGIASS APVEETSLAL
WQKNMDILST GYFLVSRAAF KILRAQDIGG SVVFIGSKNG LAASPNASAY CTAKASELHL
ARCLALEGAG AGIRVNVVNP DAVLQGSKIW QGEWLDQRAS TYGTDKAGLE EMYRDRSMLK
RSVLPGDIAE AAYFFAADLS AKSTGNIINV DAGNAQAFTR
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