| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2581 |
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| Symbol | |
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| ID | 3935044 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 2590778 |
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| End bp | 2591755 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904945 |
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| Product | AraC family transcriptional regulator |
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| Protein accession | YP_510523 |
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| Protein GI | 89055072 |
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| COG category | [K] Transcription |
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| COG ID | [COG4977] Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.0339755 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTT TTTCTGCCAA GCCGGTTCTG TTTGTCGTGT ACCCCAACTG CGTGCTGCTG
GACCTTGTCG GGCCGCTTCA GGTCTTCACC CATGCCCGCG AGACGCCCGA CGGAGCCAAC
GCGTATCAGA CCCATGTCGC GTCGAAATCT GGCGGGATGA TTGGCACGAA CACCGTGTTG
GATATCGACA GCAGCCCGTT GGAGGAGTGG CGCGACCGTC CCATCCACAC CCTGATCATC
GTCGGGGGCG ACGGCGTGTA TCCTGCGGCG AAGGATGTCC CATTCGTCCG CCAGATCAAG
GCCCTGGCCG ATCAAGCGCA GAGAATTTGC TCCGTCTGTT CGGGCGCCAT CCTTCTGGCC
GCTGCGGGGC TTTTGGACAA TCGCCGTGCC GTCACCCATT GGGAGGATTG CGACCAACTG
GCCAAGGGCT ACCCGGATGT CCGGGTGGAG GTCGACCCGA TCTATATCCG GGACGGCGCG
GTCTGGACCT CCGCCGGGAT TACCGCAGGC ATCGATATGG CGCTGGCGAT CATCGAGGAA
GATCTGGGCC ACGCAAGCGC CATCGACATG GCGCGGTCGC TCGTCACGCC CATGGTCCGC
TCGGGCGGGC AAAGCCAGTT CAGCGCCGAG TTGGACCGGC AGGCGCGCGA CACGCAGCGG
CAATTCGCCC CCCTTCACGC GTGGATCAAA GACAATATCG CGCAGAAGAT CTCTGTCGAG
GATATGGCGC AGATCTGCGG TATGAGCGGC CGGACATTCG CGCGGCGATA CGCTTTGGCG
ATGGGGTCTC CGCCCGCGAA AGCCCTCGAA GCGATCCGCG TGGACCGGGC GCGCGATCTG
CTGTCGGGCA GTGACCAGAG CCTGCAAGCC ATCGCGATCA CCTGCGGATT TCTGGATGTG
GAACGGATGC GCCGCGCCTT TCTGCGGCAG ATCCATACAT CCCCGTCCGA GTTCCGCAAA
CAGTTCCAAC TGGCCTGA
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| Protein sequence | MTSFSAKPVL FVVYPNCVLL DLVGPLQVFT HARETPDGAN AYQTHVASKS GGMIGTNTVL
DIDSSPLEEW RDRPIHTLII VGGDGVYPAA KDVPFVRQIK ALADQAQRIC SVCSGAILLA
AAGLLDNRRA VTHWEDCDQL AKGYPDVRVE VDPIYIRDGA VWTSAGITAG IDMALAIIEE
DLGHASAIDM ARSLVTPMVR SGGQSQFSAE LDRQARDTQR QFAPLHAWIK DNIAQKISVE
DMAQICGMSG RTFARRYALA MGSPPAKALE AIRVDRARDL LSGSDQSLQA IAITCGFLDV
ERMRRAFLRQ IHTSPSEFRK QFQLA
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