Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2572 |
Symbol | |
ID | 3935035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2579430 |
End bp | 2582042 |
Gene Length | 2613 bp |
Protein Length | 870 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 637904936 |
Product | hypothetical protein |
Protein accession | YP_510514 |
Protein GI | 89055063 |
COG category | [S] Function unknown |
COG ID | [COG4717] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.257377 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGGCTGC GCGCGCTCCA CCTGGGCAAT GTGCGCAAGT TCGCCGGCCA GCGCGCGTCT ATCACCGGGA TCGGCGACGG CATAACCGTG GTGTCGGAGG CCAATGAATT CGGCAAATCC ACCTTCTTCG ACGCGCTCCA CGCGCTGTTC TTTGAGAAGT ACAGCTCTGC CGCCAAGCCG GTGAAAAACC TGCAACCCTA TGCCAGGGGC GCGGTTGAGG TCGCGGCGGA GATCGAGACG GATGCAGGTC ATTTCCGCGT GGAAAAGACG TTCCTGAAGG GCTCGGGATC CGCGCGGGTC CTGCGATTGC CGGGGGAGGC GGTCGTGGCC CAGGATGATG AGGCGGAGCG TTGGCTTCTG GACTTGCTTG GGTCCGACAA GAATGGCCCG GCGGGCTTGT TGTGGGTGCG CCAGGGCGTC ACTGATCTTG CCGTCGACAG CAAGGTGGAC GGTGCCAGGC AATTGGACGA GCGCCGCGAT TTGCTGTCGT CCGTGAGCGG AGAGATTGAT GCCATGACCG GCGGTCGGCG CATGGACCGG GTGATGAAGC GCGTGGCAGA GGAGTTGAAA GGCCTGGTCA CGGCCACCGG AAAACCCACC GGCGCGTGGC GCACGCTCAA CACCGACATC GCCGGGATGA AGGAGGATCT GGCCGCGCTG ACCGCACAGA TCGATAGGCT CTCTGGTGCA CTTGCGGCGC GCAGGCAGGT GGAGGCGCAG TTGGCGCATC TGGATCAAGA GGAGGCCAGG GCCATCCGGG GGGCGGCTTT GGCCAAGGCA GAGGTGGACT TTGCCAACGC CAAAGCCCAT GCGGGTCAAG TGGATCGTGC CGCCCAAACC CACCGTCTGG CCGAGATCGA GGCGCAGGCC GCGCGCGACA AGCTGGACGT GTTTCTTGCG GCGGTGGAAA GGTTAACCAC CGCACAGGCG GCGGTGACGC AAGCGCAGGA TGTGTTGCGC GACGCCATGC GTGAGACGGG TCAACGGGAC AGTATGTTGA CGCAGATGCG GGCCACGAGG TCGGAGGCGC AACAGGCTGT TTCTCAGGCA CGCGCGGATC AGGAGGCGGC GCGCAAACAG GCCGAGGCGC GGGCCGCACG GGTGCGAGCG GACGACTTGA AGAACTGGCT GCAACAAATT GAAGATGCTC AAAAAACCCG CGATGCAGCC CATGCAAAAG TGGCGGCATC CTCGGCCACG CCCGAATGGC TTCGCCGCGT GGAAGAGGCG CAAAGTGACG TCGCCGCACA GACCGCGACC CTTGCGGCGC ACGCGGCGAC CTTGCGAATG ACCTACGATG GAGAGGCGCG TGCCCTGCGC GACGGATCAC CCCTGCCGGG CGGACAGGAC CTCGCCCTAC ATGGTGCGGT AGAGTTAACG CTGCCCGGCA TTGGCACGCT GTCATTGCAG GTGCCGGAGG TCTCCGACAC CGACCTGACC CGCGCGATGT CGACACGCGA TGATCTGTTG GCCACAGCGG CCGCAAGCGA TATCCAAGAT GCCCGCGATC TGACGGCGCA GCGTGCGGTG GCGGAGCAGG AGCGGGACAC GGCCGATGCA ATCCTGACGA CGCTGGCCCC CGGCGGACCT GACGGCTTGC GCGCGCAGAT GGCCGCTGCC GAGCTGGCCG CTGGTGAGGT CAATGACACC CCGCTGCCCG AGCCGGAGGC TCTGACCAAG ACGCTGGATC GCGCGCAGGC GGCAGACATT GAGGCGCAAG CCACCCTCAC TGTCGCGGAG ACGGCGGCAA CACAGGCACG CGAAGCTGCA ATCCGCGCCC AAGCGGCGGC GGATGCGGCA CAGCAGGCGT TGGACATGGC GCGCGCTGCC GCAGGCGCGG AAGACACGCG GGAGGCCGTC AAAACGGAGT TGATCCGCGC AAACGCCGTC GCCGCCGACG CGCTGAAAAC CACCGCGACG GCCCTCGCAA CGCTCCGTGA AAAAGCGCCT GACATGGTGA CGGCGGAAGC TGAAGTGACC CGGGCCCGCA CCGCAATCCG CGCCGCCGAT GAGCAAACCC AGAAGGCCCG CATCCGTGTC GCGGAGTTGT CCGCCGAGAT CCGCGCCCTG TCCGAGGCCG GGATCGAGGA GACCCGCGAC ACCCTTGCCG GAGAACTCGA TACCGCCCGC GCCCGGGCCG CCCGTTTTGC CGCCAAAGCC GCCGCGTTAC AGCGCCTGCA GGCCGCGCTG GACGCCGAAC GGACAGCGGC GCGAGACACC TATTTTGGTC CGGTGCAGGC AGAGCTGAAA CCGCTCCTGT CGATCCTCTA TGACGATGCG GGTTTGCAGT TTGACAGCGA CAGTCTGCTG CCCGCAGGCC TCACACGGGC CGAGACGGAG GAGACGTTGG ACCGCTTGTC CGGCGGCACG CAGGAGCAGA TCGCGATCCT GACGCGGCTG GCCTTCGCGC GGTTGTTCAA GCGGCAGGGA CGACACATGC CCATCGTTCT GGACGACGCG CTGGTCTATT CCGACGACGG GCGCATCGTG AGGATGTTCA CCGCGTTGAC CCGGGTGGCG CAGGATCAGC AAATCCTGGT GTTCACCTGC CGCACGATGG CGTTTCTGAG CCTTGGCGGC ACACGGCCGG AGGTCACAAT CCGTGACCTT TGA
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Protein sequence | MRLRALHLGN VRKFAGQRAS ITGIGDGITV VSEANEFGKS TFFDALHALF FEKYSSAAKP VKNLQPYARG AVEVAAEIET DAGHFRVEKT FLKGSGSARV LRLPGEAVVA QDDEAERWLL DLLGSDKNGP AGLLWVRQGV TDLAVDSKVD GARQLDERRD LLSSVSGEID AMTGGRRMDR VMKRVAEELK GLVTATGKPT GAWRTLNTDI AGMKEDLAAL TAQIDRLSGA LAARRQVEAQ LAHLDQEEAR AIRGAALAKA EVDFANAKAH AGQVDRAAQT HRLAEIEAQA ARDKLDVFLA AVERLTTAQA AVTQAQDVLR DAMRETGQRD SMLTQMRATR SEAQQAVSQA RADQEAARKQ AEARAARVRA DDLKNWLQQI EDAQKTRDAA HAKVAASSAT PEWLRRVEEA QSDVAAQTAT LAAHAATLRM TYDGEARALR DGSPLPGGQD LALHGAVELT LPGIGTLSLQ VPEVSDTDLT RAMSTRDDLL ATAAASDIQD ARDLTAQRAV AEQERDTADA ILTTLAPGGP DGLRAQMAAA ELAAGEVNDT PLPEPEALTK TLDRAQAADI EAQATLTVAE TAATQAREAA IRAQAAADAA QQALDMARAA AGAEDTREAV KTELIRANAV AADALKTTAT ALATLREKAP DMVTAEAEVT RARTAIRAAD EQTQKARIRV AELSAEIRAL SEAGIEETRD TLAGELDTAR ARAARFAAKA AALQRLQAAL DAERTAARDT YFGPVQAELK PLLSILYDDA GLQFDSDSLL PAGLTRAETE ETLDRLSGGT QEQIAILTRL AFARLFKRQG RHMPIVLDDA LVYSDDGRIV RMFTALTRVA QDQQILVFTC RTMAFLSLGG TRPEVTIRDL
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