| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2571 |
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| Symbol | |
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| ID | 3935034 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2578562 |
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| End bp | 2579440 |
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| Gene Length | 879 bp |
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| Protein Length | 292 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637904935 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_510513 |
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| Protein GI | 89055062 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.159237 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCTTTG AACAAATCCG CACCTTTCTC TGGGTCGCGC GCTTGGGCGG CTTTCGCAAA
GCCTCCGATC GCTTGAATCT GTCACAACCC GCCGTGTCGA CGCGGATCTC CAACCTTGAG
GGCGAGTTGC AGGTGCCACT GTTCGAGCGG GGACCGGGCC AGTTGATCCT GACCAAGCAC
GGCCAACAGC TGCTGGCCTA TGCGGAGCAG ATGCTGTTCG TGGAAGAAGA GATCAAGAAC
CGCGTCGGCA ATGCGTCCGA GACCGAAGGG CTCTTTCGCA TCGGCGCGTC CGAGACCATT
GCCCAGGCCT GGCTGCCGGA GTTTCTGGAA GCCGTCTCAG AGGCTTACCC GCGCGTGAAC
GTGGATCTCA CCGTGGATAT TTCCGGCTCC CTGCGCGACG CACTGGTGGA GCGGCGCCTG
GATCTGGTGT TTCTGATGGG GCCGATCTCG GAGTTTTCCG TGAAGAACAC AGCCCTGCCG
CAGTTCGACC TGCACTGGTA TCGCGCGGCC CATCTGCACG ACGTCAATCT GGGTGAAATC
CCAGTGATCT CCTATTCCTC CAAGACGCGG CCCCACAGGG AACTGACCAG CCAATTGGCC
GCCCGCGTTG GCCCGAAGAT GCGGGTGTTC TCCTCCGCGT CGCTCTCCGC CAGCCTGCGC
ATGATCGCGG CGGGCATTGC CGTGGGGCCG TATCCCCGGG TGCTGGCCAC GCCGTTTCTG
GAGGCCGGGC AGGTGGTCGA ATTCGACCCC GATTTGCCCC TGTCGCCGCT GGAATTCACC
GCGTCCCACC TGGCGGAGCC CCGCAGTTTT CTGGTGGAAA ACAGTGCCGA GATCGCGCGG
GATGTGGCCG AGCGCTGGCA CCGCGCGCAT CCAACATAG
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| Protein sequence | MTFEQIRTFL WVARLGGFRK ASDRLNLSQP AVSTRISNLE GELQVPLFER GPGQLILTKH
GQQLLAYAEQ MLFVEEEIKN RVGNASETEG LFRIGASETI AQAWLPEFLE AVSEAYPRVN
VDLTVDISGS LRDALVERRL DLVFLMGPIS EFSVKNTALP QFDLHWYRAA HLHDVNLGEI
PVISYSSKTR PHRELTSQLA ARVGPKMRVF SSASLSASLR MIAAGIAVGP YPRVLATPFL
EAGQVVEFDP DLPLSPLEFT ASHLAEPRSF LVENSAEIAR DVAERWHRAH PT
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