Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Jann_2545 |
Symbol | |
ID | 3935008 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Jannaschia sp. CCS1 |
Kingdom | Bacteria |
Replicon accession | NC_007802 |
Strand | - |
Start bp | 2549022 |
End bp | 2549783 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637904909 |
Product | phosphoribosylaminoimidazole-succinocarboxamide synthase |
Protein accession | YP_510487 |
Protein GI | 89055036 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0152] Phosphoribosylaminoimidazolesuccinocarboxamide (SAICAR) synthase |
TIGRFAM ID | [TIGR00081] phosphoribosylaminoimidazole-succinocarboxamide synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.179705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.630296 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACGCC GGAAGCTCGT CTATGAAGGC AAAGCAAAAA CCCTGTATGA GGGGCCGGAG CCAGGCACGC TGGTGCAGTA TTTCAAAGAC GATGCCACCG CGGGCAATGG TGAGAAGCGC GACGTGATCG ACGGCAAGGG CGTGTTGAAC AACCGCCTGT CGGAGTTCTT CATGAAGGGC CTTGGCAATA TCGGGGTGCC GACGCATTTT ATCAAACGCC TCAACATGCG CGAACAGCTG ATCCGCGCCG TAGAGATCAT TCCGCTGGAG GTTGTGGTGC GCAACACGGC GGCGGGCTCT ATCTGTTCCC GTCTGGGGAT CGAGGAGGGC ACACCGATGC CGCGCCCGAT CGTGGAATTC TACTTCAAGA ATGACGACCT GAACGACCCG ATTGTCAGTG AAGAGCATAT CATTGCCTTC GGGTGGGCCG CGCAGCAGGA TTTGGACGAT ATGGTGAGCC TGGCCTTGCG GGTGAACGAT TTCCTCAGCG GGCTGATGCT GGGGGTCGGC ATCAAACTGG TGGATTTCAA GATCGAGATC GGGCGGATCT GGGATGGCGA TTTCATGCGC CTGATCGTGG CCGATGAGAT CAGCCCCGAC AGTTGCCGCC TGTGGGATAT CGAGACGGGG CGCAAGCTGG ACAAAGACGT GTTCCGCCGC GATCTGGGGG ACCTGGCCGA TGCCTATACG GAAGTGGCCA AACGGCTCGG GATCATGCCC CAGGGCCCGG TTGGCGCGAT CAAGCCCACG CTGATTAACT GA
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Protein sequence | MARRKLVYEG KAKTLYEGPE PGTLVQYFKD DATAGNGEKR DVIDGKGVLN NRLSEFFMKG LGNIGVPTHF IKRLNMREQL IRAVEIIPLE VVVRNTAAGS ICSRLGIEEG TPMPRPIVEF YFKNDDLNDP IVSEEHIIAF GWAAQQDLDD MVSLALRVND FLSGLMLGVG IKLVDFKIEI GRIWDGDFMR LIVADEISPD SCRLWDIETG RKLDKDVFRR DLGDLADAYT EVAKRLGIMP QGPVGAIKPT LIN
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