| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2542 |
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| Symbol | |
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| ID | 3935005 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2546197 |
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| End bp | 2547963 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 637904906 |
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| Product | periplasmic sensor signal transduction histidine kinase |
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| Protein accession | YP_510484 |
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| Protein GI | 89055033 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.206032 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.256758 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTTTG CTGATCGTCC CGCATCCCCG CCCCGGCGGG GCATTCGCCG CCCCTGGGTG
CTGCGCGCGC TGATCGTGCT GTTTCTGGGC GGTGCGATCG CGATCATCTG GATCTCCAAC
ATCTGGCTGA CAGAGCGGTT CACCGAGACG ACGCGCAACC GTGCGGAGGT GCGGCTGGCG
CTCTATTCCG GCTCGGTCAT GTCCGAGATC CGGCGCCATC AGGTTGTGCC CCTGCTCCTG
AGCCGCGACC CCTCCCTGAT CCGGTCGCTG GAGGCCAATG ACTACACACA GACCACGCAA
TATCTGATCT CCTACGTGGA GGATATCGGC GCGGCGTCGA TCCTGCTTCT GGACCGTGAG
GGGCGGGTTG TGGCGGCGAC AGACCGTGCG CGCATTTCCG AGCGGCGCGA CACGGACCCT
TTCTTTGTTG AGGCCACACG GTCGCCGAAC ACCGTGTTCA CCTCCAACGA GCCCGAAACG
GGGCGCTTTG ATTTCACCTT CTCGCGCCGG ATCGAGAACG GTGATGGCCT GCTGGGTGTC
ATCCTGGTGG AAATTGACCT GGCCCGCCTG GTCGACCGCT GGCGCGGCGC GTCGGAGGCG
GTGTTTCTGG CCAATTCCCA GGGCGATATC ATCCTGTCGA CAGAGGCGCG CTGGCGGGGC
CGCACGGAGA TTGAGGCGAT GGCCCTGCGC GACCCGCCCT CGGCCATTCA GCGCGCGTTG
GAAGGGGCGG GGAACTGGGC GTTCGGCGAC CCTGACCCCA ACTTCTTCGG CGCGGCCACG
ATCCGGCTGG AGGCGCGTAT CCCGTTTCGC GGGTGGCGCA TCGTCAGCTA CACGGCCTAC
ACGTCGGTGC GGGAGCGGGT GAACGGGGTC CTGGCGCTGG AGATTATGGG ATTCGCCCTG
GCGCTGGCCG CCGCATTTTA CCTGCTGAGC CGTCAGGCCC GGTCACAGAC GGCGGTGCTG
GCGCGCGAGT CGGCGGAGTT GCGCCGCCTC AACGGGCGCC TACAGCGAGA AATTGCCGAA
CGTCAAAGGG TTGAACGGAC CCTGGAGGAG GCGGAACTGA GCCTTCAGCA GAGCCAAAAA
CTGGCCGCAT TGGGGGAGAT GTCGGCCGCC GTCTCGCACG AGTTGAACCA GCCGCTGGCG
GCGATGAAAA CCTACCTCGC CGGGGCGCGG CTTTTGTTGC AGCGAAAACG CACCGAGGAG
GCCGCCTCCA GCTTCCAGCG GATCGATGAC CTGATCGAGC GGATGGGCGC CATCACGCGG
CAGCTGAAAT CCTATGCCCG CAAGGGCGGA GATGCCCTTG AGCCGGTCGA TATGCGGGAT
GCTCTGAAGG GCGCTTTGAC GATGATGGAG CCGCAATTGC GCAGCGACAC GGTCCACATC
ACGCAAAGCC TGCCGCGCAA GCCGGCCCTG GTCATGGCCG ACCGTCTGCG GCTGGAGCAG
GTGATCATCA ATTTGCTGCG CAATGCGCTG GACGCGATGG GCGGGGCCGA TGAGAAGGAA
TTGGACCTGA TTATCGTGGA AGGTGACGAA GTTGTGTTGA CCGTGCGCGA CAGCGGACCG
GGGATTGACG ATCTGGATGC TTTGTTCGAG CCATTCTACA CGACAAAGAA ACCCGGAGAG
GGGGTTGGTC TTGGGCTGGC CATCTCCTCG GGGATCGTGA AAGACCTTGG CGGGCGTCTG
TCGGCGCGCA ACGGGGAACA GGAAGGCGCG GTGTTTGAGA TCCGTCTGCC TGCGCTGGAT
GAGGCGCAGA GTGAAGCGGC GGAATAA
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| Protein sequence | MSFADRPASP PRRGIRRPWV LRALIVLFLG GAIAIIWISN IWLTERFTET TRNRAEVRLA
LYSGSVMSEI RRHQVVPLLL SRDPSLIRSL EANDYTQTTQ YLISYVEDIG AASILLLDRE
GRVVAATDRA RISERRDTDP FFVEATRSPN TVFTSNEPET GRFDFTFSRR IENGDGLLGV
ILVEIDLARL VDRWRGASEA VFLANSQGDI ILSTEARWRG RTEIEAMALR DPPSAIQRAL
EGAGNWAFGD PDPNFFGAAT IRLEARIPFR GWRIVSYTAY TSVRERVNGV LALEIMGFAL
ALAAAFYLLS RQARSQTAVL ARESAELRRL NGRLQREIAE RQRVERTLEE AELSLQQSQK
LAALGEMSAA VSHELNQPLA AMKTYLAGAR LLLQRKRTEE AASSFQRIDD LIERMGAITR
QLKSYARKGG DALEPVDMRD ALKGALTMME PQLRSDTVHI TQSLPRKPAL VMADRLRLEQ
VIINLLRNAL DAMGGADEKE LDLIIVEGDE VVLTVRDSGP GIDDLDALFE PFYTTKKPGE
GVGLGLAISS GIVKDLGGRL SARNGEQEGA VFEIRLPALD EAQSEAAE
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