| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2535 |
|---|
| Symbol | |
|---|
| ID | 3934998 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | + |
|---|
| Start bp | 2536694 |
|---|
| End bp | 2537296 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 637904899 |
|---|
| Product | methyltransferase type 12 |
|---|
| Protein accession | YP_510477 |
|---|
| Protein GI | 89055026 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4106] Trans-aconitate methyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.444646 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.207866 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACCTG AAGACATCTT GCCGGCCTAT GCGGTTGAGG CCGCCCATTG GGCCCGTCAG
CGCAATCTCG ATCTGTGGGA GCGTCCGGCG CTGGAGGCCT GCGTGGCAGA CCGTGCCCCC
GGGCTGCGTG TTCTTGATCT GGGATGCGGG TCCGGACAGC CCATTGCGCA GTGGTTCGTG
GCACGGGGTG ACGTCGTATG CGGGGTCGAC GGCGTGGCCG AAATGCTGGC TGAATGCGCC
CGCCGGGTGC CCGAGGTGGC GCGGGTCCAC GCCGATATGC GCAGGTTGGC ACTGGGTCGT
CAGTTCGACA TCATCCTGGC GTTCAACAGT TTTTTCCACC TGACCCCGGA TGATCAGCGC
GCCATGTTCC CGGTCTTCAG GGCCCATGCC GCCCCCGACG CGCGATTGCT CTTTACCTCA
GGCCCCAGCG CCGGGGAGGC TGTGGGACAG GTCGGTACCA GCCCCGTCTA CCACGCGAGC
CTTGACCCCG ATGAATACCG CAACCTTCTG GCCACCCATG GGTTTGAACT CGTCTGGTTT
CGCCCCGAAG ATGCGGAATT GCGCGGCCAC AGCGTCTGGC TCGCGCGGTT TACTGACGCC
TGA
|
|---|
| Protein sequence | MGPEDILPAY AVEAAHWARQ RNLDLWERPA LEACVADRAP GLRVLDLGCG SGQPIAQWFV
ARGDVVCGVD GVAEMLAECA RRVPEVARVH ADMRRLALGR QFDIILAFNS FFHLTPDDQR
AMFPVFRAHA APDARLLFTS GPSAGEAVGQ VGTSPVYHAS LDPDEYRNLL ATHGFELVWF
RPEDAELRGH SVWLARFTDA
|
|---|
| |