| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2531 |
|---|
| Symbol | |
|---|
| ID | 3934994 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Jannaschia sp. CCS1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007802 |
|---|
| Strand | - |
|---|
| Start bp | 2530419 |
|---|
| End bp | 2531222 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637904895 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_510473 |
|---|
| Protein GI | 89055022 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5473] Predicted integral membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.849481 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.0611922 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGACA TCGCGACACA CCCTGTTGGA GAGGGCGCGC CCGCGATCCG CGACCTTCGC
CTTGGCGACA TCGGCACCGC TTTGCGATTG GGGTTGAAGG ATTTCCTGCG CAAACCCGCG
ATGGGGCTCT TTTTCGGGGC GACTTATGTG GTGGGAGGCT GGCTCCTCTA CCTGTTTCTG
ATCGTGACGG ATCAGATCTG GTTCGCGATC CCGATCACCG TTGGCTTCCC GCTTCTGGGC
CCGTTTCTGG CCGTGGGGCT TTACGAGATC TCCCGCAGAC TTGAGGCGGG CCAAACGGAC
TGGCCACGCA ACGACATCCT TGGCGTCATC TGGCGTCAAC GCCTCCGGCA ATTGCCGTCC
ATGGCCTGGG TCGTGATCGT CTATTTCCTG TTCTGGTCAT TCTTCGCGCA TATGCTGTTC
GCGCTTTTCC TCGGGCCGTC AGCGCTGACC AATGTGACCA GCTCCTACGC CTACCTTCTG
CAACCCGAGG GCATTTTGAT GCTGCTGGTG GGCACGGGGT TCGGGGCGGT CTTCGCCTTC
GTGCTTTTCG CGCTCACCGC CGTGTCGCTG CCGCTGCTTC TGGACCGGGA AGTGGACTTT
GTGACAGCGA TGATCACGTC CATCTCAGTC GTAAAGCAGA ATCTGGGCAT CATGTTGATC
TGGGGTGTCG TGATCGCAGG ACTGACATTT CTGGCGATGG TGCCGGGACT GTTTGGTCTT
TTGGTGGTAT TGCCGCTTCT GGGCCACGCG TCTTGGCACA TGTACCGATT GGCGACGGCC
ACGGGGCCTT CGACATCGCC ATAA
|
|---|
| Protein sequence | MSDIATHPVG EGAPAIRDLR LGDIGTALRL GLKDFLRKPA MGLFFGATYV VGGWLLYLFL
IVTDQIWFAI PITVGFPLLG PFLAVGLYEI SRRLEAGQTD WPRNDILGVI WRQRLRQLPS
MAWVVIVYFL FWSFFAHMLF ALFLGPSALT NVTSSYAYLL QPEGILMLLV GTGFGAVFAF
VLFALTAVSL PLLLDREVDF VTAMITSISV VKQNLGIMLI WGVVIAGLTF LAMVPGLFGL
LVVLPLLGHA SWHMYRLATA TGPSTSP
|
|---|
| |