| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_2520 |
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| Symbol | tgt |
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| ID | 3934983 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | - |
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| Start bp | 2520139 |
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| End bp | 2521269 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 637904884 |
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| Product | queuine tRNA-ribosyltransferase |
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| Protein accession | YP_510462 |
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| Protein GI | 89055011 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0343] Queuine/archaeosine tRNA-ribosyltransferase |
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| TIGRFAM ID | [TIGR00430] tRNA-guanine transglycosylase, queuosine-34-forming
[TIGR00449] tRNA-guanine transglycosylases, various specificities |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.783169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.199825 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAGAG CATCCTCTTT CCGCCTCGAC GCAACCTCGG GCAAGGCCCG CACGGGTGTG
ATCCAAACCC CGCGCGGCGA CATTCGCACG CCCGCCTTCA TGCCCGTGGG CACGGCCGCC
ACGGTCAAGG CGATGATGCC TGAATCGGTG GCCGCGACCG GCGCGGATAT TCTGTTGGGC
AACACCTATC ACCTGATGCT GCGCCCCACG GCGGAGCGGA TCGCCAACCT CGGCGGGCTG
CACAGCTTCA TGAATTGGGA CAAGCCGATC CTGACGGATT CGGGCGGGTT CCAAGTCATG
AGCCTCGCCG ATCTGCGCAA GCTGACCGAG GAGGGCGTGA CCTTCCGGTC CCACATCGAC
GGGTCCAAAC ATCTGCTCAG CCCCGAGCGG TCGATGGAGA TCCAGAAGCT TCTCGGCTCG
GACATTGTCA TGTGTTTCGA TGAATGCCCC GCGCTGCCCG CAGATCGCAA AGCGCTGGAC
GACAGCATGC GCCTGTCGAT GCGGTGGGCC GCGCGGTCCA AGGAGGCGTT CGGGGACCGT
CCCGGCTATG CGTTGTTCGG CATCCAGCAG GGTGGTTTGG AAGAAGACCT GCGTGAGGAA
TCCGCCAAGG CCCTGCGGGA GATCGGGTTC GATGGCTACG CGGTCGGCGG CCTTGCGGTG
GGAGAGGGGC AGGCGGCCAT GTTCGGCTGC CTCGACTTCG CGCCGGATCA ACTTCCCACC
GACAAGCCGC GCTACCTGAT GGGCGTGGGC AAGCCGGACG ATATCGTGGG CGCGGTGAAG
CGCGGCATAG ACATGATGGA TTGCGTGCTG CCATCTCGCT CGGGCCGCAC CGGGCAGGCG
TGGACGCGGC GGGGGCAGGT GAACATCAAG AATGCGCGCC ACGCCGATGA CCCCCGCCCG
CTGGACGAGG ACTGCACCTG TCCTGCGTGC CGCAACTATT CCCGCGCATA TCTGCACCAT
GTGTTTCGCG CACAGGAGAT GATCAGCGGT ATGCTCCTGA CCTGGCACAA CCTGCACTAT
TATCAGGAGC TGATGCAGAC GATGCGCGAT GCCATCGCCG CGAATGACTT TGCAGGGTTT
GAGGCGCGGT TTCACGCGGA CCGTGCGGAA GGCGATATCG TGCCACTCTA G
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| Protein sequence | MTRASSFRLD ATSGKARTGV IQTPRGDIRT PAFMPVGTAA TVKAMMPESV AATGADILLG
NTYHLMLRPT AERIANLGGL HSFMNWDKPI LTDSGGFQVM SLADLRKLTE EGVTFRSHID
GSKHLLSPER SMEIQKLLGS DIVMCFDECP ALPADRKALD DSMRLSMRWA ARSKEAFGDR
PGYALFGIQQ GGLEEDLREE SAKALREIGF DGYAVGGLAV GEGQAAMFGC LDFAPDQLPT
DKPRYLMGVG KPDDIVGAVK RGIDMMDCVL PSRSGRTGQA WTRRGQVNIK NARHADDPRP
LDEDCTCPAC RNYSRAYLHH VFRAQEMISG MLLTWHNLHY YQELMQTMRD AIAANDFAGF
EARFHADRAE GDIVPL
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