Gene Jann_2511 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagJann_2511 
Symbol 
ID3934972 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameJannaschia sp. CCS1 
KingdomBacteria 
Replicon accessionNC_007802 
Strand
Start bp2511009 
End bp2511368 
Gene Length360 bp 
Protein Length119 aa 
Translation table11 
GC content64% 
IMG OID637904873 
ProductMerR family transcriptional regulator 
Protein accessionYP_510453 
Protein GI89055002 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.22268 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.240301 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCT CTGAAGTGTC CGAACGCTCT GGCCTGAGCG TGGCGACAAT CCGCTACTAT 
GAGAGGGCTG GAATCTGCCC AAAGATCCCT CGCGACGGGG CAGGTCACAG GGTGTTCACG
CCCGAAATGC TGGCATGGCT GACCCTGTTG GCCGCGCTGC GCGACACCGG CATGGGGACG
GAGAAGATGA CCGCCTTCGC CATGCTGTAC CGCGACGGGG ACGCCACCGT GGCGGCGCGA
AAACGGATGC TGATGGAGCA TCAGACCGCC CTGGCCGCCC AACAGGCGCG TCTGGATGCC
TGCCAGGCGC TGCTGGCCCA GAAGCTGACG CGCTACGATG AAATCCTGGG AGACGGGTGA
 
Protein sequence
MQISEVSERS GLSVATIRYY ERAGICPKIP RDGAGHRVFT PEMLAWLTLL AALRDTGMGT 
EKMTAFAMLY RDGDATVAAR KRMLMEHQTA LAAQQARLDA CQALLAQKLT RYDEILGDG